Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CSMD1Q96PZ7 AL353803.4-201ENST00000565882 1934 ntBASIC18.21■□□□□ 0.5
CSMD1Q96PZ7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD1Q96PZ7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD1Q96PZ7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD1Q96PZ7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD1Q96PZ7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CSMD1Q96PZ7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD1Q96PZ7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD1Q96PZ7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.2■□□□□ 0.5
CSMD1Q96PZ7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD1Q96PZ7 FAM197Y4-202ENST00000622692 608 ntBASIC18.2■□□□□ 0.5
CSMD1Q96PZ7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.2■□□□□ 0.5
CSMD1Q96PZ7 LINC01124-201ENST00000409786 2117 ntBASIC18.2■□□□□ 0.5
CSMD1Q96PZ7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 LINC00543-201ENST00000567234 1845 ntBASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 TMPOP1-202ENST00000424642 1267 ntBASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.19■□□□□ 0.5
CSMD1Q96PZ7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 TSPY7P-201ENST00000431358 1114 ntBASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 AC079630.1-202ENST00000618127 1840 ntBASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 OXCT2P1-201ENST00000447263 1535 ntBASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.18■□□□□ 0.5
CSMD1Q96PZ7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 POU5F1P4-201ENST00000413175 1085 ntBASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 CD177P1-201ENST00000606252 935 ntBASIC18.17■□□□□ 0.5
CSMD1Q96PZ7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CSMD1Q96PZ7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD1Q96PZ7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.16■□□□□ 0.5
CSMD1Q96PZ7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD1Q96PZ7 ARMC10P1-201ENST00000313754 855 ntBASIC18.16■□□□□ 0.5
CSMD1Q96PZ7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CSMD1Q96PZ7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD1Q96PZ7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD1Q96PZ7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD1Q96PZ7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.16■□□□□ 0.5
CSMD1Q96PZ7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.16■□□□□ 0.5
CSMD1Q96PZ7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.15■□□□□ 0.5
CSMD1Q96PZ7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSMD1Q96PZ7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSMD1Q96PZ7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSMD1Q96PZ7 AC233702.5-201ENST00000584107 538 ntBASIC18.15■□□□□ 0.5
CSMD1Q96PZ7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.15■□□□□ 0.5
CSMD1Q96PZ7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSMD1Q96PZ7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSMD1Q96PZ7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CSMD1Q96PZ7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms