Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RITA1Q96K30 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.04■□□□□ 0.32
RITA1Q96K30 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RITA1Q96K30 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RITA1Q96K30 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RITA1Q96K30 AF106564.1-201ENST00000607058 2553 ntBASIC17.04■□□□□ 0.32
RITA1Q96K30 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RITA1Q96K30 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RITA1Q96K30 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.04■□□□□ 0.32
RITA1Q96K30 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RITA1Q96K30 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.04■□□□□ 0.32
RITA1Q96K30 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RITA1Q96K30 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.03■□□□□ 0.32
RITA1Q96K30 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RITA1Q96K30 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RITA1Q96K30 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RITA1Q96K30 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.03■□□□□ 0.32
RITA1Q96K30 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RITA1Q96K30 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.03■□□□□ 0.32
RITA1Q96K30 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RITA1Q96K30 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.03■□□□□ 0.32
RITA1Q96K30 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RITA1Q96K30 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RITA1Q96K30 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RITA1Q96K30 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RITA1Q96K30 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.03■□□□□ 0.32
RITA1Q96K30 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RITA1Q96K30 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.03■□□□□ 0.32
RITA1Q96K30 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RITA1Q96K30 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.03■□□□□ 0.32
RITA1Q96K30 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RITA1Q96K30 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RITA1Q96K30 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RITA1Q96K30 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RITA1Q96K30 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.02■□□□□ 0.32
RITA1Q96K30 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RITA1Q96K30 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RITA1Q96K30 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.02■□□□□ 0.32
RITA1Q96K30 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RITA1Q96K30 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RITA1Q96K30 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RITA1Q96K30 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RITA1Q96K30 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RITA1Q96K30 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RITA1Q96K30 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RITA1Q96K30 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RITA1Q96K30 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RITA1Q96K30 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RITA1Q96K30 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RITA1Q96K30 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RITA1Q96K30 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RITA1Q96K30 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.01■□□□□ 0.31
RITA1Q96K30 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.01■□□□□ 0.31
RITA1Q96K30 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RITA1Q96K30 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.01■□□□□ 0.31
RITA1Q96K30 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RITA1Q96K30 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RITA1Q96K30 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RITA1Q96K30 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RITA1Q96K30 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RITA1Q96K30 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17■□□□□ 0.31
RITA1Q96K30 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RITA1Q96K30 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17■□□□□ 0.31
RITA1Q96K30 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17■□□□□ 0.31
RITA1Q96K30 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RITA1Q96K30 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RITA1Q96K30 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RITA1Q96K30 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17■□□□□ 0.31
RITA1Q96K30 AC027612.3-201ENST00000413684 1047 ntBASIC17■□□□□ 0.31
RITA1Q96K30 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17■□□□□ 0.31
RITA1Q96K30 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RITA1Q96K30 SP2-202ENST00000613139 908 ntTSL 5 BASIC17■□□□□ 0.31
RITA1Q96K30 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17■□□□□ 0.31
RITA1Q96K30 FEM1AP4-201ENST00000443167 1987 ntBASIC17■□□□□ 0.31
RITA1Q96K30 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RITA1Q96K30 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RITA1Q96K30 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RITA1Q96K30 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RITA1Q96K30 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RITA1Q96K30 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RITA1Q96K30 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17■□□□□ 0.31
RITA1Q96K30 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RITA1Q96K30 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RITA1Q96K30 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RITA1Q96K30 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.99■□□□□ 0.31
RITA1Q96K30 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.99■□□□□ 0.31
RITA1Q96K30 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.99■□□□□ 0.31
RITA1Q96K30 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.99■□□□□ 0.31
RITA1Q96K30 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.99■□□□□ 0.31
RITA1Q96K30 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.99■□□□□ 0.31
RITA1Q96K30 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.99■□□□□ 0.31
RITA1Q96K30 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
RITA1Q96K30 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RITA1Q96K30 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.99■□□□□ 0.31
RITA1Q96K30 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
RITA1Q96K30 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RITA1Q96K30 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RITA1Q96K30 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RITA1Q96K30 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RITA1Q96K30 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms