Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM11Q96F44 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM11Q96F44 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.42■■□□□ 1.18
TRIM11Q96F44 AC005229.4-201ENST00000610085 2198 ntBASIC22.42■■□□□ 1.18
TRIM11Q96F44 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
TRIM11Q96F44 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM11Q96F44 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.42■■□□□ 1.18
TRIM11Q96F44 MIR939-201ENST00000401314 82 ntBASIC22.42■■□□□ 1.18
TRIM11Q96F44 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.42■■□□□ 1.18
TRIM11Q96F44 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.42■■□□□ 1.18
TRIM11Q96F44 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
TRIM11Q96F44 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.42■■□□□ 1.18
TRIM11Q96F44 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM11Q96F44 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.42■■□□□ 1.18
TRIM11Q96F44 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.42■■□□□ 1.18
TRIM11Q96F44 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM11Q96F44 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM11Q96F44 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM11Q96F44 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM11Q96F44 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM11Q96F44 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.41■■□□□ 1.18
TRIM11Q96F44 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM11Q96F44 AF213884.3-201ENST00000563833 479 ntBASIC22.41■■□□□ 1.18
TRIM11Q96F44 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.41■■□□□ 1.18
TRIM11Q96F44 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM11Q96F44 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM11Q96F44 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM11Q96F44 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM11Q96F44 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM11Q96F44 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM11Q96F44 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM11Q96F44 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM11Q96F44 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM11Q96F44 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM11Q96F44 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM11Q96F44 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM11Q96F44 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.4■■□□□ 1.18
TRIM11Q96F44 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM11Q96F44 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM11Q96F44 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM11Q96F44 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.4■■□□□ 1.18
TRIM11Q96F44 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM11Q96F44 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM11Q96F44 MIR572-201ENST00000384983 95 ntBASIC22.4■■□□□ 1.18
TRIM11Q96F44 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.4■■□□□ 1.18
TRIM11Q96F44 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.4■■□□□ 1.18
TRIM11Q96F44 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM11Q96F44 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM11Q96F44 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM11Q96F44 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRIM11Q96F44 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
TRIM11Q96F44 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
TRIM11Q96F44 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
TRIM11Q96F44 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM11Q96F44 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.39■■□□□ 1.17
TRIM11Q96F44 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
TRIM11Q96F44 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM11Q96F44 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM11Q96F44 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM11Q96F44 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
TRIM11Q96F44 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM11Q96F44 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.17
TRIM11Q96F44 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM11Q96F44 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM11Q96F44 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM11Q96F44 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM11Q96F44 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM11Q96F44 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM11Q96F44 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.38■■□□□ 1.17
TRIM11Q96F44 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.38■■□□□ 1.17
TRIM11Q96F44 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.38■■□□□ 1.17
TRIM11Q96F44 BX005040.4-201ENST00000637145 1518 ntBASIC22.38■■□□□ 1.17
TRIM11Q96F44 AL024507.2-201ENST00000606070 2574 ntBASIC22.38■■□□□ 1.17
TRIM11Q96F44 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.38■■□□□ 1.17
TRIM11Q96F44 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM11Q96F44 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.38■■□□□ 1.17
TRIM11Q96F44 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.38■■□□□ 1.17
TRIM11Q96F44 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM11Q96F44 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM11Q96F44 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM11Q96F44 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.38■■□□□ 1.17
TRIM11Q96F44 AC055733.4-201ENST00000638462 1354 ntBASIC22.38■■□□□ 1.17
TRIM11Q96F44 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM11Q96F44 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM11Q96F44 AC005224.4-201ENST00000583262 1652 ntBASIC22.37■■□□□ 1.17
TRIM11Q96F44 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.37■■□□□ 1.17
TRIM11Q96F44 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
TRIM11Q96F44 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM11Q96F44 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM11Q96F44 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM11Q96F44 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM11Q96F44 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM11Q96F44 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM11Q96F44 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM11Q96F44 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM11Q96F44 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM11Q96F44 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.37■■□□□ 1.17
TRIM11Q96F44 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.37■■□□□ 1.17
TRIM11Q96F44 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.37■■□□□ 1.17
TRIM11Q96F44 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms