Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NCLNQ969V3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCLNQ969V3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCLNQ969V3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.46■□□□□ 0.87
NCLNQ969V3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NCLNQ969V3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NCLNQ969V3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
NCLNQ969V3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NCLNQ969V3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.46■□□□□ 0.87
NCLNQ969V3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.46■□□□□ 0.87
NCLNQ969V3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.46■□□□□ 0.87
NCLNQ969V3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.46■□□□□ 0.87
NCLNQ969V3 TSPY26P-201ENST00000476365 1326 ntBASIC20.46■□□□□ 0.87
NCLNQ969V3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
NCLNQ969V3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCLNQ969V3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCLNQ969V3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCLNQ969V3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCLNQ969V3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCLNQ969V3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCLNQ969V3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.45■□□□□ 0.86
NCLNQ969V3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.45■□□□□ 0.86
NCLNQ969V3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.45■□□□□ 0.86
NCLNQ969V3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NCLNQ969V3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCLNQ969V3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCLNQ969V3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
NCLNQ969V3 AC005229.4-201ENST00000610085 2198 ntBASIC20.45■□□□□ 0.86
NCLNQ969V3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NCLNQ969V3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
NCLNQ969V3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCLNQ969V3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NCLNQ969V3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCLNQ969V3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCLNQ969V3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCLNQ969V3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.44■□□□□ 0.86
NCLNQ969V3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.44■□□□□ 0.86
NCLNQ969V3 IGHV3-19-201ENST00000521488 291 ntBASIC20.44■□□□□ 0.86
NCLNQ969V3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.44■□□□□ 0.86
NCLNQ969V3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCLNQ969V3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NCLNQ969V3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCLNQ969V3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCLNQ969V3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NCLNQ969V3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.43■□□□□ 0.86
NCLNQ969V3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.43■□□□□ 0.86
NCLNQ969V3 AP005435.1-201ENST00000529293 1178 ntBASIC20.43■□□□□ 0.86
NCLNQ969V3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.43■□□□□ 0.86
NCLNQ969V3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
NCLNQ969V3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NCLNQ969V3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.43■□□□□ 0.86
NCLNQ969V3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.43■□□□□ 0.86
NCLNQ969V3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCLNQ969V3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLNQ969V3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLNQ969V3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.42■□□□□ 0.86
NCLNQ969V3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NCLNQ969V3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLNQ969V3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLNQ969V3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLNQ969V3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLNQ969V3 AC244015.2-201ENST00000616358 1861 ntBASIC20.42■□□□□ 0.86
NCLNQ969V3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NCLNQ969V3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.42■□□□□ 0.86
NCLNQ969V3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCLNQ969V3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.42■□□□□ 0.86
NCLNQ969V3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLNQ969V3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCLNQ969V3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.42■□□□□ 0.86
NCLNQ969V3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
NCLNQ969V3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLNQ969V3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLNQ969V3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.42■□□□□ 0.86
NCLNQ969V3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.42■□□□□ 0.86
NCLNQ969V3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLNQ969V3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCLNQ969V3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLNQ969V3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCLNQ969V3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLNQ969V3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLNQ969V3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.41■□□□□ 0.86
NCLNQ969V3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLNQ969V3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCLNQ969V3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NCLNQ969V3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms