Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HPS1Q92902 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS1Q92902 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS1Q92902 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
HPS1Q92902 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS1Q92902 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS1Q92902 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPS1Q92902 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPS1Q92902 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HPS1Q92902 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPS1Q92902 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS1Q92902 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HPS1Q92902 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HPS1Q92902 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPS1Q92902 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.19■□□□□ 0.66
HPS1Q92902 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPS1Q92902 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPS1Q92902 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
HPS1Q92902 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPS1Q92902 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPS1Q92902 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HPS1Q92902 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.19■□□□□ 0.66
HPS1Q92902 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.19■□□□□ 0.66
HPS1Q92902 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.19■□□□□ 0.66
HPS1Q92902 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS1Q92902 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS1Q92902 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS1Q92902 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.18■□□□□ 0.66
HPS1Q92902 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HPS1Q92902 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HPS1Q92902 UNC93B3-201ENST00000308076 687 ntBASIC19.18■□□□□ 0.66
HPS1Q92902 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HPS1Q92902 DUX4L19-201ENST00000557448 1267 ntBASIC19.18■□□□□ 0.66
HPS1Q92902 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HPS1Q92902 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.18■□□□□ 0.66
HPS1Q92902 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.18■□□□□ 0.66
HPS1Q92902 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.18■□□□□ 0.66
HPS1Q92902 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS1Q92902 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS1Q92902 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS1Q92902 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.18■□□□□ 0.66
HPS1Q92902 AC079630.1-202ENST00000618127 1840 ntBASIC19.18■□□□□ 0.66
HPS1Q92902 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS1Q92902 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.18■□□□□ 0.66
HPS1Q92902 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS1Q92902 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HPS1Q92902 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.18■□□□□ 0.66
HPS1Q92902 AC010542.4-201ENST00000563151 1910 ntBASIC19.17■□□□□ 0.66
HPS1Q92902 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.17■□□□□ 0.66
HPS1Q92902 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS1Q92902 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HPS1Q92902 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS1Q92902 LINC01006-201ENST00000333319 2292 ntBASIC19.17■□□□□ 0.66
HPS1Q92902 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.17■□□□□ 0.66
HPS1Q92902 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS1Q92902 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HPS1Q92902 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HPS1Q92902 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HPS1Q92902 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HPS1Q92902 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS1Q92902 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HPS1Q92902 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.17■□□□□ 0.66
HPS1Q92902 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.17■□□□□ 0.66
HPS1Q92902 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS1Q92902 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HPS1Q92902 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HPS1Q92902 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HPS1Q92902 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS1Q92902 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS1Q92902 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS1Q92902 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS1Q92902 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.16■□□□□ 0.66
HPS1Q92902 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.16■□□□□ 0.66
HPS1Q92902 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS1Q92902 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS1Q92902 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS1Q92902 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS1Q92902 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.16■□□□□ 0.66
HPS1Q92902 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HPS1Q92902 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.16■□□□□ 0.66
HPS1Q92902 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HPS1Q92902 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.16■□□□□ 0.66
HPS1Q92902 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HPS1Q92902 AL136162.1-201ENST00000607711 1078 ntBASIC19.16■□□□□ 0.66
HPS1Q92902 AC092171.4-201ENST00000609130 632 ntBASIC19.16■□□□□ 0.66
HPS1Q92902 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.16■□□□□ 0.66
HPS1Q92902 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HPS1Q92902 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS1Q92902 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS1Q92902 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS1Q92902 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS1Q92902 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS1Q92902 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
HPS1Q92902 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
HPS1Q92902 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HPS1Q92902 AC142381.2-201ENST00000566120 298 ntBASIC19.15■□□□□ 0.66
HPS1Q92902 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HPS1Q92902 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HPS1Q92902 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.15■□□□□ 0.66
HPS1Q92902 AC135279.3-201ENST00000610945 1311 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms