Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
USP6NLQ92738 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.16■■□□□ 1.46
USP6NLQ92738 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.16■■□□□ 1.46
USP6NLQ92738 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
USP6NLQ92738 POU5F1P4-201ENST00000413175 1085 ntBASIC24.16■■□□□ 1.46
USP6NLQ92738 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC24.16■■□□□ 1.46
USP6NLQ92738 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC24.16■■□□□ 1.46
USP6NLQ92738 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.16■■□□□ 1.46
USP6NLQ92738 AL591742.1-201ENST00000604433 565 ntBASIC24.16■■□□□ 1.46
USP6NLQ92738 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.16■■□□□ 1.46
USP6NLQ92738 AP006294.2-201ENST00000641667 209 ntBASIC24.16■■□□□ 1.46
USP6NLQ92738 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
USP6NLQ92738 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
USP6NLQ92738 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
USP6NLQ92738 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
USP6NLQ92738 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
USP6NLQ92738 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC24.15■■□□□ 1.46
USP6NLQ92738 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
USP6NLQ92738 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
USP6NLQ92738 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.15■■□□□ 1.46
USP6NLQ92738 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
USP6NLQ92738 AC120498.10-201ENST00000621827 505 ntBASIC24.15■■□□□ 1.46
USP6NLQ92738 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
USP6NLQ92738 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
USP6NLQ92738 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.14■■□□□ 1.46
USP6NLQ92738 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
USP6NLQ92738 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
USP6NLQ92738 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.14■■□□□ 1.45
USP6NLQ92738 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
USP6NLQ92738 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
USP6NLQ92738 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.14■■□□□ 1.45
USP6NLQ92738 AC128676.1-201ENST00000454392 318 ntBASIC24.14■■□□□ 1.45
USP6NLQ92738 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC24.14■■□□□ 1.45
USP6NLQ92738 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
USP6NLQ92738 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.14■■□□□ 1.45
USP6NLQ92738 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.14■■□□□ 1.45
USP6NLQ92738 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
USP6NLQ92738 AC006058.3-201ENST00000606217 1069 ntBASIC24.14■■□□□ 1.45
USP6NLQ92738 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.14■■□□□ 1.45
USP6NLQ92738 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
USP6NLQ92738 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.13■■□□□ 1.45
USP6NLQ92738 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP6NLQ92738 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP6NLQ92738 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP6NLQ92738 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.13■■□□□ 1.45
USP6NLQ92738 KRT16P2-201ENST00000414673 1423 ntBASIC24.13■■□□□ 1.45
USP6NLQ92738 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC24.13■■□□□ 1.45
USP6NLQ92738 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP6NLQ92738 AC243732.1-201ENST00000612648 864 ntBASIC24.13■■□□□ 1.45
USP6NLQ92738 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.13■■□□□ 1.45
USP6NLQ92738 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.13■■□□□ 1.45
USP6NLQ92738 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP6NLQ92738 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
USP6NLQ92738 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.12■■□□□ 1.45
USP6NLQ92738 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
USP6NLQ92738 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.12■■□□□ 1.45
USP6NLQ92738 AL596275.1-201ENST00000423464 877 ntBASIC24.12■■□□□ 1.45
USP6NLQ92738 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.12■■□□□ 1.45
USP6NLQ92738 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC24.12■■□□□ 1.45
USP6NLQ92738 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC24.12■■□□□ 1.45
USP6NLQ92738 INO80E-214ENST00000620599 515 ntTSL 2 BASIC24.12■■□□□ 1.45
USP6NLQ92738 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.12■■□□□ 1.45
USP6NLQ92738 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.12■■□□□ 1.45
USP6NLQ92738 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
USP6NLQ92738 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
USP6NLQ92738 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
USP6NLQ92738 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
USP6NLQ92738 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
USP6NLQ92738 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
USP6NLQ92738 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
USP6NLQ92738 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC24.11■■□□□ 1.45
USP6NLQ92738 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
USP6NLQ92738 AC142381.4-202ENST00000563973 229 ntBASIC24.11■■□□□ 1.45
USP6NLQ92738 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
USP6NLQ92738 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.11■■□□□ 1.45
USP6NLQ92738 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
USP6NLQ92738 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
USP6NLQ92738 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
USP6NLQ92738 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
USP6NLQ92738 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
USP6NLQ92738 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
USP6NLQ92738 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC24.1■■□□□ 1.45
USP6NLQ92738 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC24.1■■□□□ 1.45
USP6NLQ92738 MMD2-204ENST00000612910 778 ntTSL 5 BASIC24.1■■□□□ 1.45
USP6NLQ92738 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.1■■□□□ 1.45
USP6NLQ92738 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
USP6NLQ92738 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
USP6NLQ92738 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
USP6NLQ92738 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.09■■□□□ 1.45
USP6NLQ92738 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.09■■□□□ 1.45
USP6NLQ92738 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
USP6NLQ92738 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
USP6NLQ92738 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
USP6NLQ92738 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
USP6NLQ92738 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
USP6NLQ92738 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.09■■□□□ 1.45
USP6NLQ92738 UNC93B5-201ENST00000530315 699 ntBASIC24.09■■□□□ 1.45
USP6NLQ92738 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
USP6NLQ92738 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.09■■□□□ 1.45
USP6NLQ92738 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms