Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.18■□□□□ 0.66
PHF3Q92576 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PHF3Q92576 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHF3Q92576 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.17■□□□□ 0.66
PHF3Q92576 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.17■□□□□ 0.66
PHF3Q92576 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHF3Q92576 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.17■□□□□ 0.66
PHF3Q92576 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHF3Q92576 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.17■□□□□ 0.66
PHF3Q92576 MYCNOS-205ENST00000641950 531 ntBASIC19.17■□□□□ 0.66
PHF3Q92576 AC010542.4-201ENST00000563151 1910 ntBASIC19.17■□□□□ 0.66
PHF3Q92576 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PHF3Q92576 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHF3Q92576 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PHF3Q92576 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHF3Q92576 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PHF3Q92576 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.17■□□□□ 0.66
PHF3Q92576 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PHF3Q92576 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PHF3Q92576 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.17■□□□□ 0.66
PHF3Q92576 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
PHF3Q92576 AL109923.1-201ENST00000618799 583 ntBASIC19.17■□□□□ 0.66
PHF3Q92576 AC231657.2-201ENST00000624556 255 ntBASIC19.17■□□□□ 0.66
PHF3Q92576 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.16■□□□□ 0.66
PHF3Q92576 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
PHF3Q92576 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PHF3Q92576 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PHF3Q92576 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHF3Q92576 SLC7A5P2-201ENST00000553010 536 ntBASIC19.16■□□□□ 0.66
PHF3Q92576 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.16■□□□□ 0.66
PHF3Q92576 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.16■□□□□ 0.66
PHF3Q92576 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PHF3Q92576 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PHF3Q92576 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHF3Q92576 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.15■□□□□ 0.66
PHF3Q92576 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.15■□□□□ 0.66
PHF3Q92576 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.15■□□□□ 0.66
PHF3Q92576 AC011767.1-201ENST00000617410 1153 ntBASIC19.15■□□□□ 0.66
PHF3Q92576 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHF3Q92576 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PHF3Q92576 C11orf96-202ENST00000528572 1834 ntBASIC19.15■□□□□ 0.66
PHF3Q92576 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
PHF3Q92576 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHF3Q92576 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHF3Q92576 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHF3Q92576 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHF3Q92576 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.15■□□□□ 0.66
PHF3Q92576 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.15■□□□□ 0.66
PHF3Q92576 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.15■□□□□ 0.66
PHF3Q92576 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.15■□□□□ 0.66
PHF3Q92576 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHF3Q92576 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.15■□□□□ 0.66
PHF3Q92576 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHF3Q92576 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PHF3Q92576 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHF3Q92576 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.14■□□□□ 0.65
PHF3Q92576 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.14■□□□□ 0.65
PHF3Q92576 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHF3Q92576 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHF3Q92576 AC055733.4-201ENST00000638462 1354 ntBASIC19.14■□□□□ 0.65
PHF3Q92576 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PHF3Q92576 AP004607.7-201ENST00000527152 1677 ntBASIC19.14■□□□□ 0.65
PHF3Q92576 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.14■□□□□ 0.65
PHF3Q92576 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHF3Q92576 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHF3Q92576 KRT18P20-201ENST00000548986 1279 ntBASIC19.13■□□□□ 0.65
PHF3Q92576 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHF3Q92576 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHF3Q92576 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PHF3Q92576 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PHF3Q92576 GPX1P1-201ENST00000388829 606 ntBASIC19.13■□□□□ 0.65
PHF3Q92576 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PHF3Q92576 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.13■□□□□ 0.65
PHF3Q92576 AC138907.5-202ENST00000569484 235 ntBASIC19.13■□□□□ 0.65
PHF3Q92576 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PHF3Q92576 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHF3Q92576 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHF3Q92576 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.13■□□□□ 0.65
PHF3Q92576 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHF3Q92576 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.12■□□□□ 0.65
PHF3Q92576 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
PHF3Q92576 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PHF3Q92576 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PHF3Q92576 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF3Q92576 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF3Q92576 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PHF3Q92576 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.12■□□□□ 0.65
PHF3Q92576 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PHF3Q92576 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PHF3Q92576 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.12■□□□□ 0.65
PHF3Q92576 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.12■□□□□ 0.65
PHF3Q92576 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.12■□□□□ 0.65
PHF3Q92576 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.12■□□□□ 0.65
PHF3Q92576 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.12■□□□□ 0.65
PHF3Q92576 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PHF3Q92576 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PHF3Q92576 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF3Q92576 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.12■□□□□ 0.65
PHF3Q92576 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF3Q92576 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms