Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH3RF3Q8TEJ3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SH3RF3Q8TEJ3 AL121832.2-201ENST00000610979 668 ntBASIC25.34■■□□□ 1.65
SH3RF3Q8TEJ3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH3RF3Q8TEJ3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SH3RF3Q8TEJ3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SH3RF3Q8TEJ3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.34■■□□□ 1.65
SH3RF3Q8TEJ3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 GUSBP6-202ENST00000438529 1198 ntBASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 TERF1P5-201ENST00000477545 1207 ntBASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SH3RF3Q8TEJ3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
SH3RF3Q8TEJ3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.32■■□□□ 1.64
SH3RF3Q8TEJ3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
SH3RF3Q8TEJ3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SH3RF3Q8TEJ3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
SH3RF3Q8TEJ3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC25.32■■□□□ 1.64
SH3RF3Q8TEJ3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC25.32■■□□□ 1.64
SH3RF3Q8TEJ3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SH3RF3Q8TEJ3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
SH3RF3Q8TEJ3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.31■■□□□ 1.64
SH3RF3Q8TEJ3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3RF3Q8TEJ3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
SH3RF3Q8TEJ3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3RF3Q8TEJ3 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.31■■□□□ 1.64
SH3RF3Q8TEJ3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SH3RF3Q8TEJ3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.31■■□□□ 1.64
SH3RF3Q8TEJ3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3RF3Q8TEJ3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SH3RF3Q8TEJ3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SH3RF3Q8TEJ3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.3■■□□□ 1.64
SH3RF3Q8TEJ3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SH3RF3Q8TEJ3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.3■■□□□ 1.64
SH3RF3Q8TEJ3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.3■■□□□ 1.64
SH3RF3Q8TEJ3 TSPY6P-201ENST00000448518 926 ntBASIC25.3■■□□□ 1.64
SH3RF3Q8TEJ3 AC008175.2-201ENST00000612840 297 ntBASIC25.3■■□□□ 1.64
SH3RF3Q8TEJ3 AC061975.6-201ENST00000579045 1553 ntBASIC25.3■■□□□ 1.64
SH3RF3Q8TEJ3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SH3RF3Q8TEJ3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SH3RF3Q8TEJ3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SH3RF3Q8TEJ3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SH3RF3Q8TEJ3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
SH3RF3Q8TEJ3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
SH3RF3Q8TEJ3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.29■■□□□ 1.64
SH3RF3Q8TEJ3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.29■■□□□ 1.64
SH3RF3Q8TEJ3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.29■■□□□ 1.64
SH3RF3Q8TEJ3 AC013268.1-206ENST00000638368 961 ntBASIC25.29■■□□□ 1.64
SH3RF3Q8TEJ3 AC112229.1-201ENST00000639295 961 ntBASIC25.29■■□□□ 1.64
SH3RF3Q8TEJ3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.29■■□□□ 1.64
SH3RF3Q8TEJ3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.29■■□□□ 1.64
SH3RF3Q8TEJ3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SH3RF3Q8TEJ3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SH3RF3Q8TEJ3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.28■■□□□ 1.64
SH3RF3Q8TEJ3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
SH3RF3Q8TEJ3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SH3RF3Q8TEJ3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
SH3RF3Q8TEJ3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
SH3RF3Q8TEJ3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SH3RF3Q8TEJ3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SH3RF3Q8TEJ3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SH3RF3Q8TEJ3 AC010542.4-201ENST00000563151 1910 ntBASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 POU5F1P4-201ENST00000413175 1085 ntBASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 AC068338.2-201ENST00000563278 1430 ntBASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SH3RF3Q8TEJ3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SH3RF3Q8TEJ3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SH3RF3Q8TEJ3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
SH3RF3Q8TEJ3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
SH3RF3Q8TEJ3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.26■■□□□ 1.63
SH3RF3Q8TEJ3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SH3RF3Q8TEJ3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.26■■□□□ 1.63
SH3RF3Q8TEJ3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC25.26■■□□□ 1.63
SH3RF3Q8TEJ3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SH3RF3Q8TEJ3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.26■■□□□ 1.63
SH3RF3Q8TEJ3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.26■■□□□ 1.63
SH3RF3Q8TEJ3 FAM99A-202ENST00000538190 1989 ntBASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms