Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC2Q8TAQ2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SMARCC2Q8TAQ2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMARCC2Q8TAQ2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMARCC2Q8TAQ2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.86■■□□□ 1.57
SMARCC2Q8TAQ2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMARCC2Q8TAQ2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMARCC2Q8TAQ2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.86■■□□□ 1.57
SMARCC2Q8TAQ2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
SMARCC2Q8TAQ2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.86■■□□□ 1.57
SMARCC2Q8TAQ2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.86■■□□□ 1.57
SMARCC2Q8TAQ2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
SMARCC2Q8TAQ2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
SMARCC2Q8TAQ2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.85■■□□□ 1.57
SMARCC2Q8TAQ2 LINC02228-203ENST00000641970 1355 ntBASIC24.85■■□□□ 1.57
SMARCC2Q8TAQ2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SMARCC2Q8TAQ2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.85■■□□□ 1.57
SMARCC2Q8TAQ2 AC034268.1-201ENST00000441047 882 ntBASIC24.85■■□□□ 1.57
SMARCC2Q8TAQ2 AC005229.4-201ENST00000610085 2198 ntBASIC24.85■■□□□ 1.57
SMARCC2Q8TAQ2 FEM1AP4-201ENST00000443167 1987 ntBASIC24.85■■□□□ 1.57
SMARCC2Q8TAQ2 AP006587.3-201ENST00000525742 1516 ntBASIC24.85■■□□□ 1.57
SMARCC2Q8TAQ2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SMARCC2Q8TAQ2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
SMARCC2Q8TAQ2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SMARCC2Q8TAQ2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SMARCC2Q8TAQ2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.84■■□□□ 1.57
SMARCC2Q8TAQ2 BX005040.4-201ENST00000637145 1518 ntBASIC24.84■■□□□ 1.57
SMARCC2Q8TAQ2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SMARCC2Q8TAQ2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SMARCC2Q8TAQ2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SMARCC2Q8TAQ2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SMARCC2Q8TAQ2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
SMARCC2Q8TAQ2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.83■■□□□ 1.57
SMARCC2Q8TAQ2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SMARCC2Q8TAQ2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SMARCC2Q8TAQ2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.82■■□□□ 1.56
SMARCC2Q8TAQ2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SMARCC2Q8TAQ2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.82■■□□□ 1.56
SMARCC2Q8TAQ2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SMARCC2Q8TAQ2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.82■■□□□ 1.56
SMARCC2Q8TAQ2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.82■■□□□ 1.56
SMARCC2Q8TAQ2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
SMARCC2Q8TAQ2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.82■■□□□ 1.56
SMARCC2Q8TAQ2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.82■■□□□ 1.56
SMARCC2Q8TAQ2 CCDC92B-201ENST00000575506 885 ntBASIC24.82■■□□□ 1.56
SMARCC2Q8TAQ2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.82■■□□□ 1.56
SMARCC2Q8TAQ2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SMARCC2Q8TAQ2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SMARCC2Q8TAQ2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SMARCC2Q8TAQ2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMARCC2Q8TAQ2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.81■■□□□ 1.56
SMARCC2Q8TAQ2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMARCC2Q8TAQ2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24.81■■□□□ 1.56
SMARCC2Q8TAQ2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMARCC2Q8TAQ2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMARCC2Q8TAQ2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.81■■□□□ 1.56
SMARCC2Q8TAQ2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMARCC2Q8TAQ2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
SMARCC2Q8TAQ2 AL162430.1-201ENST00000480705 870 ntBASIC24.81■■□□□ 1.56
SMARCC2Q8TAQ2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.81■■□□□ 1.56
SMARCC2Q8TAQ2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMARCC2Q8TAQ2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 DUX4L2-201ENST00000561772 1275 ntBASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 DUX4L6-201ENST00000626483 1275 ntBASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 DUX4L1-201ENST00000627662 1275 ntBASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 DUX4L8-201ENST00000629013 1275 ntBASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 DUX4L3-201ENST00000630187 1275 ntBASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 DUX4L7-201ENST00000630678 1275 ntBASIC24.8■■□□□ 1.56
SMARCC2Q8TAQ2 DUX4L5-201ENST00000630834 1275 ntBASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms