Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD2Q8NHY2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 KRT125P-201ENST00000546827 989 ntBASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD2Q8NHY2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD2Q8NHY2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD2Q8NHY2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RFWD2Q8NHY2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.9■□□□□ 0.94
RFWD2Q8NHY2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD2Q8NHY2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RFWD2Q8NHY2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD2Q8NHY2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD2Q8NHY2 AC239859.2-201ENST00000444165 318 ntBASIC20.9■□□□□ 0.94
RFWD2Q8NHY2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD2Q8NHY2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD2Q8NHY2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD2Q8NHY2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFWD2Q8NHY2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RFWD2Q8NHY2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.89■□□□□ 0.93
RFWD2Q8NHY2 AL391422.3-201ENST00000603791 2761 ntBASIC20.89■□□□□ 0.93
RFWD2Q8NHY2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.89■□□□□ 0.93
RFWD2Q8NHY2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD2Q8NHY2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD2Q8NHY2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD2Q8NHY2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RFWD2Q8NHY2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD2Q8NHY2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.89■□□□□ 0.93
RFWD2Q8NHY2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD2Q8NHY2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RFWD2Q8NHY2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RFWD2Q8NHY2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFWD2Q8NHY2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 AL031602.1-201ENST00000633169 911 ntBASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RFWD2Q8NHY2 OR7E47P-201ENST00000546390 1422 ntBASIC20.87■□□□□ 0.93
RFWD2Q8NHY2 AC021242.3-201ENST00000607598 1377 ntBASIC20.87■□□□□ 0.93
RFWD2Q8NHY2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RFWD2Q8NHY2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFWD2Q8NHY2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.87■□□□□ 0.93
RFWD2Q8NHY2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.87■□□□□ 0.93
RFWD2Q8NHY2 AL499627.2-201ENST00000606283 725 ntBASIC20.87■□□□□ 0.93
RFWD2Q8NHY2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFWD2Q8NHY2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFWD2Q8NHY2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RFWD2Q8NHY2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.87■□□□□ 0.93
RFWD2Q8NHY2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFWD2Q8NHY2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFWD2Q8NHY2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFWD2Q8NHY2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.86■□□□□ 0.93
RFWD2Q8NHY2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD2Q8NHY2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD2Q8NHY2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD2Q8NHY2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
RFWD2Q8NHY2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD2Q8NHY2 MIR4787-201ENST00000607364 84 ntBASIC20.86■□□□□ 0.93
RFWD2Q8NHY2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.86■□□□□ 0.93
RFWD2Q8NHY2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD2Q8NHY2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD2Q8NHY2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RFWD2Q8NHY2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD2Q8NHY2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD2Q8NHY2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD2Q8NHY2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.85■□□□□ 0.93
RFWD2Q8NHY2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms