Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PRPF38AQ8NAV1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PRPF38AQ8NAV1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.54■■□□□ 1.52
PRPF38AQ8NAV1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PRPF38AQ8NAV1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
PRPF38AQ8NAV1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PRPF38AQ8NAV1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PRPF38AQ8NAV1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.54■■□□□ 1.52
PRPF38AQ8NAV1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 POU5F1P4-201ENST00000413175 1085 ntBASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 GUSBP6-202ENST00000438529 1198 ntBASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 AC133552.2-202ENST00000575694 574 ntBASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 AC120498.10-201ENST00000621827 505 ntBASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.53■■□□□ 1.52
PRPF38AQ8NAV1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PRPF38AQ8NAV1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.52■■□□□ 1.52
PRPF38AQ8NAV1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PRPF38AQ8NAV1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PRPF38AQ8NAV1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.52■■□□□ 1.52
PRPF38AQ8NAV1 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.52■■□□□ 1.52
PRPF38AQ8NAV1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.52■■□□□ 1.52
PRPF38AQ8NAV1 AC092053.2-201ENST00000640557 1818 ntBASIC24.51■■□□□ 1.51
PRPF38AQ8NAV1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PRPF38AQ8NAV1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
PRPF38AQ8NAV1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
PRPF38AQ8NAV1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
PRPF38AQ8NAV1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PRPF38AQ8NAV1 AF201337.1-201ENST00000520239 748 ntBASIC24.51■■□□□ 1.51
PRPF38AQ8NAV1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PRPF38AQ8NAV1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.51■■□□□ 1.51
PRPF38AQ8NAV1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.51■■□□□ 1.51
PRPF38AQ8NAV1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
PRPF38AQ8NAV1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PRPF38AQ8NAV1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.5■■□□□ 1.51
PRPF38AQ8NAV1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PRPF38AQ8NAV1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PRPF38AQ8NAV1 AC068473.5-201ENST00000616428 2072 ntBASIC24.5■■□□□ 1.51
PRPF38AQ8NAV1 AC068338.2-201ENST00000563278 1430 ntBASIC24.5■■□□□ 1.51
PRPF38AQ8NAV1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.5■■□□□ 1.51
PRPF38AQ8NAV1 C1orf229-201ENST00000623686 2258 ntBASIC24.5■■□□□ 1.51
PRPF38AQ8NAV1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PRPF38AQ8NAV1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.5■■□□□ 1.51
PRPF38AQ8NAV1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 SLC29A4P1-201ENST00000398760 971 ntBASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 AC007322.4-201ENST00000509611 723 ntBASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 AC003102.1-202ENST00000563394 1796 ntBASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 AC127496.7-201ENST00000625110 1798 ntBASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.49■■□□□ 1.51
PRPF38AQ8NAV1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PRPF38AQ8NAV1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
PRPF38AQ8NAV1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
PRPF38AQ8NAV1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.48■■□□□ 1.51
PRPF38AQ8NAV1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.48■■□□□ 1.51
PRPF38AQ8NAV1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.48■■□□□ 1.51
PRPF38AQ8NAV1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.48■■□□□ 1.51
PRPF38AQ8NAV1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.48■■□□□ 1.51
PRPF38AQ8NAV1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.48■■□□□ 1.51
PRPF38AQ8NAV1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.47■■□□□ 1.51
PRPF38AQ8NAV1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PRPF38AQ8NAV1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PRPF38AQ8NAV1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PRPF38AQ8NAV1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PRPF38AQ8NAV1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PRPF38AQ8NAV1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
PRPF38AQ8NAV1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.47■■□□□ 1.51
PRPF38AQ8NAV1 AC105036.2-201ENST00000569468 176 ntBASIC24.47■■□□□ 1.51
PRPF38AQ8NAV1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
PRPF38AQ8NAV1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.47■■□□□ 1.51
PRPF38AQ8NAV1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PRPF38AQ8NAV1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.46■■□□□ 1.51
PRPF38AQ8NAV1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PRPF38AQ8NAV1 AC080038.3-201ENST00000623346 1952 ntBASIC24.46■■□□□ 1.51
PRPF38AQ8NAV1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PRPF38AQ8NAV1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.46■■□□□ 1.51
PRPF38AQ8NAV1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms