Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSMEM1Q8N8F7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 MIR939-201ENST00000401314 82 ntBASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 TSPY26P-201ENST00000476365 1326 ntBASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSMEM1Q8N8F7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 AC091305.1-201ENST00000479476 895 ntBASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 AL031432.3-201ENST00000607698 485 ntBASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 AC009237.3-201ENST00000393279 1427 ntBASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LSMEM1Q8N8F7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
LSMEM1Q8N8F7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LSMEM1Q8N8F7 FEM1AP4-201ENST00000443167 1987 ntBASIC19.39■□□□□ 0.7
LSMEM1Q8N8F7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 AL136967.2-201ENST00000623968 743 ntBASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSMEM1Q8N8F7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 AC105233.4-201ENST00000642045 216 ntBASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSMEM1Q8N8F7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 MIR572-201ENST00000384983 95 ntBASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 AF213884.3-201ENST00000563833 479 ntBASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSMEM1Q8N8F7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSMEM1Q8N8F7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms