Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.06
PCDH20Q8N6Y1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDH20Q8N6Y1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH20Q8N6Y1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDH20Q8N6Y1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDH20Q8N6Y1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH20Q8N6Y1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH20Q8N6Y1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH20Q8N6Y1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDH20Q8N6Y1 AC007375.3-201ENST00000600936 2314 ntBASIC21.64■■□□□ 1.05
PCDH20Q8N6Y1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH20Q8N6Y1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH20Q8N6Y1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 AL137784.2-201ENST00000607332 1000 ntBASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 AC092437.1-201ENST00000624794 1048 ntBASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.63■■□□□ 1.05
PCDH20Q8N6Y1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 AC137761.2-201ENST00000561729 223 ntBASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 AC145350.3-201ENST00000569033 163 ntBASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 AC104187.1-201ENST00000607510 612 ntBASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PCDH20Q8N6Y1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 AC242852.2-201ENST00000615738 1807 ntBASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH20Q8N6Y1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDH20Q8N6Y1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH20Q8N6Y1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PCDH20Q8N6Y1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH20Q8N6Y1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH20Q8N6Y1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH20Q8N6Y1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDH20Q8N6Y1 AC016769.1-201ENST00000409132 1010 ntBASIC21.6■■□□□ 1.05
PCDH20Q8N6Y1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDH20Q8N6Y1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH20Q8N6Y1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCDH20Q8N6Y1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH20Q8N6Y1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH20Q8N6Y1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH20Q8N6Y1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PCDH20Q8N6Y1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PCDH20Q8N6Y1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH20Q8N6Y1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH20Q8N6Y1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH20Q8N6Y1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH20Q8N6Y1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDH20Q8N6Y1 AC006015.1-201ENST00000429970 570 ntBASIC21.59■■□□□ 1.05
PCDH20Q8N6Y1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDH20Q8N6Y1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDH20Q8N6Y1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH20Q8N6Y1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH20Q8N6Y1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH20Q8N6Y1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms