Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.58■■□□□ 1.21
TTC39CQ8N584 AP004607.4-201ENST00000530158 1459 ntBASIC22.58■■□□□ 1.2
TTC39CQ8N584 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TTC39CQ8N584 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.58■■□□□ 1.2
TTC39CQ8N584 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TTC39CQ8N584 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TTC39CQ8N584 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
TTC39CQ8N584 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.58■■□□□ 1.2
TTC39CQ8N584 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TTC39CQ8N584 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
TTC39CQ8N584 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC39CQ8N584 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC39CQ8N584 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC39CQ8N584 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC39CQ8N584 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.57■■□□□ 1.2
TTC39CQ8N584 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.57■■□□□ 1.2
TTC39CQ8N584 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TTC39CQ8N584 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.57■■□□□ 1.2
TTC39CQ8N584 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.57■■□□□ 1.2
TTC39CQ8N584 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
TTC39CQ8N584 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.57■■□□□ 1.2
TTC39CQ8N584 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC39CQ8N584 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC39CQ8N584 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC39CQ8N584 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC39CQ8N584 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.57■■□□□ 1.2
TTC39CQ8N584 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TTC39CQ8N584 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.57■■□□□ 1.2
TTC39CQ8N584 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC39CQ8N584 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TTC39CQ8N584 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TTC39CQ8N584 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
TTC39CQ8N584 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
TTC39CQ8N584 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TTC39CQ8N584 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TTC39CQ8N584 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TTC39CQ8N584 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.56■■□□□ 1.2
TTC39CQ8N584 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.56■■□□□ 1.2
TTC39CQ8N584 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.56■■□□□ 1.2
TTC39CQ8N584 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.56■■□□□ 1.2
TTC39CQ8N584 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
TTC39CQ8N584 NTF6G-201ENST00000591094 616 ntBASIC22.56■■□□□ 1.2
TTC39CQ8N584 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.56■■□□□ 1.2
TTC39CQ8N584 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.56■■□□□ 1.2
TTC39CQ8N584 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
TTC39CQ8N584 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.56■■□□□ 1.2
TTC39CQ8N584 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TTC39CQ8N584 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TTC39CQ8N584 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TTC39CQ8N584 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TTC39CQ8N584 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.55■■□□□ 1.2
TTC39CQ8N584 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39CQ8N584 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39CQ8N584 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39CQ8N584 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TTC39CQ8N584 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39CQ8N584 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39CQ8N584 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39CQ8N584 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.55■■□□□ 1.2
TTC39CQ8N584 POU5F1P4-201ENST00000413175 1085 ntBASIC22.55■■□□□ 1.2
TTC39CQ8N584 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.55■■□□□ 1.2
TTC39CQ8N584 AC008175.2-201ENST00000612840 297 ntBASIC22.55■■□□□ 1.2
TTC39CQ8N584 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.55■■□□□ 1.2
TTC39CQ8N584 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TTC39CQ8N584 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39CQ8N584 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39CQ8N584 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39CQ8N584 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TTC39CQ8N584 AC004854.2-201ENST00000608450 1441 ntBASIC22.55■■□□□ 1.2
TTC39CQ8N584 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39CQ8N584 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39CQ8N584 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39CQ8N584 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39CQ8N584 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39CQ8N584 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39CQ8N584 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.54■■□□□ 1.2
TTC39CQ8N584 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.54■■□□□ 1.2
TTC39CQ8N584 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39CQ8N584 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39CQ8N584 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.54■■□□□ 1.2
TTC39CQ8N584 AC010141.2-201ENST00000452426 721 ntBASIC22.54■■□□□ 1.2
TTC39CQ8N584 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.54■■□□□ 1.2
TTC39CQ8N584 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.54■■□□□ 1.2
TTC39CQ8N584 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39CQ8N584 AC104187.1-201ENST00000607510 612 ntBASIC22.54■■□□□ 1.2
TTC39CQ8N584 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TTC39CQ8N584 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39CQ8N584 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39CQ8N584 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39CQ8N584 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39CQ8N584 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39CQ8N584 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39CQ8N584 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39CQ8N584 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39CQ8N584 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39CQ8N584 FBXW4P1-201ENST00000426721 2239 ntBASIC22.53■■□□□ 1.2
TTC39CQ8N584 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39CQ8N584 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39CQ8N584 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
TTC39CQ8N584 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms