Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 AC007375.3-201ENST00000600936 2314 ntBASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ZNF440Q8IYI8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF440Q8IYI8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.39■□□□□ 0.7
ZNF440Q8IYI8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF440Q8IYI8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF440Q8IYI8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF440Q8IYI8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF440Q8IYI8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
ZNF440Q8IYI8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF440Q8IYI8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF440Q8IYI8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF440Q8IYI8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
ZNF440Q8IYI8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF440Q8IYI8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
ZNF440Q8IYI8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF440Q8IYI8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF440Q8IYI8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF440Q8IYI8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.38■□□□□ 0.69
ZNF440Q8IYI8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ZNF440Q8IYI8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF440Q8IYI8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF440Q8IYI8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF440Q8IYI8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.38■□□□□ 0.69
ZNF440Q8IYI8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF440Q8IYI8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF440Q8IYI8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF440Q8IYI8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF440Q8IYI8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF440Q8IYI8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF440Q8IYI8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms