Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC30.66■■■□□ 2.5
UBR1Q8IWV7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
UBR1Q8IWV7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC30.66■■■□□ 2.5
UBR1Q8IWV7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
UBR1Q8IWV7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
UBR1Q8IWV7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
UBR1Q8IWV7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC30.65■■■□□ 2.5
UBR1Q8IWV7 AC120498.10-201ENST00000621827 505 ntBASIC30.65■■■□□ 2.5
UBR1Q8IWV7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC30.65■■■□□ 2.5
UBR1Q8IWV7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
UBR1Q8IWV7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
UBR1Q8IWV7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
UBR1Q8IWV7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC30.64■■■□□ 2.5
UBR1Q8IWV7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC30.64■■■□□ 2.5
UBR1Q8IWV7 MIR4497-201ENST00000583208 89 ntBASIC30.64■■■□□ 2.5
UBR1Q8IWV7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
UBR1Q8IWV7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
UBR1Q8IWV7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
UBR1Q8IWV7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
UBR1Q8IWV7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC30.64■■■□□ 2.5
UBR1Q8IWV7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
UBR1Q8IWV7 AL591742.1-201ENST00000604433 565 ntBASIC30.64■■■□□ 2.5
UBR1Q8IWV7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC30.64■■■□□ 2.5
UBR1Q8IWV7 AC020928.2-201ENST00000588717 2197 ntBASIC30.63■■■□□ 2.49
UBR1Q8IWV7 POU5F1P4-201ENST00000413175 1085 ntBASIC30.63■■■□□ 2.49
UBR1Q8IWV7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
UBR1Q8IWV7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC30.63■■■□□ 2.49
UBR1Q8IWV7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
UBR1Q8IWV7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
UBR1Q8IWV7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
UBR1Q8IWV7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
UBR1Q8IWV7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
UBR1Q8IWV7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC30.63■■■□□ 2.49
UBR1Q8IWV7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC30.63■■■□□ 2.49
UBR1Q8IWV7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
UBR1Q8IWV7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
UBR1Q8IWV7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
UBR1Q8IWV7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
UBR1Q8IWV7 AC073912.3-201ENST00000624414 853 ntBASIC30.62■■■□□ 2.49
UBR1Q8IWV7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC30.62■■■□□ 2.49
UBR1Q8IWV7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC30.62■■■□□ 2.49
UBR1Q8IWV7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
UBR1Q8IWV7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
UBR1Q8IWV7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
UBR1Q8IWV7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
UBR1Q8IWV7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
UBR1Q8IWV7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC30.61■■■□□ 2.49
UBR1Q8IWV7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC30.61■■■□□ 2.49
UBR1Q8IWV7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
UBR1Q8IWV7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC30.6■■■□□ 2.49
UBR1Q8IWV7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
UBR1Q8IWV7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC30.6■■■□□ 2.49
UBR1Q8IWV7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
UBR1Q8IWV7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC30.6■■■□□ 2.49
UBR1Q8IWV7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC30.59■■■□□ 2.49
UBR1Q8IWV7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC30.59■■■□□ 2.49
UBR1Q8IWV7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
UBR1Q8IWV7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
UBR1Q8IWV7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
UBR1Q8IWV7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
UBR1Q8IWV7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC30.59■■■□□ 2.49
UBR1Q8IWV7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
UBR1Q8IWV7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
UBR1Q8IWV7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
UBR1Q8IWV7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC30.59■■■□□ 2.49
UBR1Q8IWV7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
UBR1Q8IWV7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
UBR1Q8IWV7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC30.58■■■□□ 2.49
UBR1Q8IWV7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC30.58■■■□□ 2.49
UBR1Q8IWV7 AL355472.2-201ENST00000422958 438 ntBASIC30.58■■■□□ 2.49
UBR1Q8IWV7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
UBR1Q8IWV7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC30.58■■■□□ 2.49
UBR1Q8IWV7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC30.57■■■□□ 2.49
UBR1Q8IWV7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC30.57■■■□□ 2.48
UBR1Q8IWV7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
UBR1Q8IWV7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
UBR1Q8IWV7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
UBR1Q8IWV7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC30.57■■■□□ 2.48
UBR1Q8IWV7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC30.57■■■□□ 2.48
UBR1Q8IWV7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
UBR1Q8IWV7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
UBR1Q8IWV7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
UBR1Q8IWV7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC30.56■■■□□ 2.48
UBR1Q8IWV7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC30.56■■■□□ 2.48
UBR1Q8IWV7 ECEL1P3-201ENST00000427961 737 ntBASIC30.56■■■□□ 2.48
UBR1Q8IWV7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
UBR1Q8IWV7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
UBR1Q8IWV7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC30.56■■■□□ 2.48
UBR1Q8IWV7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
UBR1Q8IWV7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC30.56■■■□□ 2.48
UBR1Q8IWV7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC30.56■■■□□ 2.48
UBR1Q8IWV7 FAM197Y4-202ENST00000622692 608 ntBASIC30.56■■■□□ 2.48
UBR1Q8IWV7 ANOS2P-203ENST00000472227 1816 ntBASIC30.55■■■□□ 2.48
UBR1Q8IWV7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
UBR1Q8IWV7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
UBR1Q8IWV7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
UBR1Q8IWV7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC30.55■■■□□ 2.48
UBR1Q8IWV7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC30.55■■■□□ 2.48
UBR1Q8IWV7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
UBR1Q8IWV7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC30.55■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms