Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC60Q8IWA6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC60Q8IWA6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC60Q8IWA6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
CCDC60Q8IWA6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC60Q8IWA6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC60Q8IWA6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 MIR663A-201ENST00000385250 93 ntBASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC60Q8IWA6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC60Q8IWA6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC60Q8IWA6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC60Q8IWA6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC60Q8IWA6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC60Q8IWA6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC60Q8IWA6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC60Q8IWA6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC60Q8IWA6 HLA-L-209ENST00000420110 1011 ntBASIC23.67■■□□□ 1.38
CCDC60Q8IWA6 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.67■■□□□ 1.38
CCDC60Q8IWA6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.67■■□□□ 1.38
CCDC60Q8IWA6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC60Q8IWA6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC60Q8IWA6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.66■■□□□ 1.38
CCDC60Q8IWA6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC60Q8IWA6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC60Q8IWA6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC60Q8IWA6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC60Q8IWA6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.66■■□□□ 1.38
CCDC60Q8IWA6 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.66■■□□□ 1.38
CCDC60Q8IWA6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC60Q8IWA6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC60Q8IWA6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC60Q8IWA6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 CNN2P6-201ENST00000439038 900 ntBASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 AC006970.2-201ENST00000450065 779 ntBASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 AL050303.2-201ENST00000619798 666 ntBASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 AC010536.3-201ENST00000620306 533 ntBASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC60Q8IWA6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.64■■□□□ 1.38
CCDC60Q8IWA6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC60Q8IWA6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC60Q8IWA6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC60Q8IWA6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC60Q8IWA6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC60Q8IWA6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC60Q8IWA6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.64■■□□□ 1.37
CCDC60Q8IWA6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.64■■□□□ 1.37
CCDC60Q8IWA6 SLC7A5P1-201ENST00000568957 537 ntBASIC23.64■■□□□ 1.37
CCDC60Q8IWA6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC60Q8IWA6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.64■■□□□ 1.37
CCDC60Q8IWA6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CCDC60Q8IWA6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC60Q8IWA6 AC231657.2-201ENST00000624556 255 ntBASIC23.64■■□□□ 1.37
CCDC60Q8IWA6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC60Q8IWA6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 AC008175.2-201ENST00000612840 297 ntBASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
CCDC60Q8IWA6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms