Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF135Q8IUD6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
RNF135Q8IUD6 AC142381.4-202ENST00000563973 229 ntBASIC22.47■■□□□ 1.19
RNF135Q8IUD6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.47■■□□□ 1.19
RNF135Q8IUD6 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.47■■□□□ 1.19
RNF135Q8IUD6 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.47■■□□□ 1.19
RNF135Q8IUD6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF135Q8IUD6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF135Q8IUD6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF135Q8IUD6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF135Q8IUD6 MKRN4P-201ENST00000444706 1521 ntBASIC22.47■■□□□ 1.19
RNF135Q8IUD6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF135Q8IUD6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.45■■□□□ 1.19
RNF135Q8IUD6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.45■■□□□ 1.18
RNF135Q8IUD6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.45■■□□□ 1.18
RNF135Q8IUD6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF135Q8IUD6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.45■■□□□ 1.18
RNF135Q8IUD6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
RNF135Q8IUD6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF135Q8IUD6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF135Q8IUD6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF135Q8IUD6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.45■■□□□ 1.18
RNF135Q8IUD6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF135Q8IUD6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF135Q8IUD6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
RNF135Q8IUD6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF135Q8IUD6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.44■■□□□ 1.18
RNF135Q8IUD6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF135Q8IUD6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.44■■□□□ 1.18
RNF135Q8IUD6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.44■■□□□ 1.18
RNF135Q8IUD6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF135Q8IUD6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 AC009237.3-201ENST00000393279 1427 ntBASIC22.43■■□□□ 1.18
RNF135Q8IUD6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF135Q8IUD6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF135Q8IUD6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
RNF135Q8IUD6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.42■■□□□ 1.18
RNF135Q8IUD6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.42■■□□□ 1.18
RNF135Q8IUD6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF135Q8IUD6 AC092118.2-201ENST00000613495 667 ntBASIC22.42■■□□□ 1.18
RNF135Q8IUD6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.42■■□□□ 1.18
RNF135Q8IUD6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
RNF135Q8IUD6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 AC006058.3-201ENST00000606217 1069 ntBASIC22.41■■□□□ 1.18
RNF135Q8IUD6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF135Q8IUD6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF135Q8IUD6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF135Q8IUD6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.4■■□□□ 1.18
RNF135Q8IUD6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RNF135Q8IUD6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms