Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.68■■□□□ 1.38
RNF180Q86T96 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.68■■□□□ 1.38
RNF180Q86T96 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF180Q86T96 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF180Q86T96 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF180Q86T96 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
RNF180Q86T96 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.67■■□□□ 1.38
RNF180Q86T96 RPS2P4-201ENST00000476944 856 ntBASIC23.67■■□□□ 1.38
RNF180Q86T96 AC243732.1-201ENST00000612648 864 ntBASIC23.67■■□□□ 1.38
RNF180Q86T96 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF180Q86T96 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
RNF180Q86T96 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF180Q86T96 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
RNF180Q86T96 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF180Q86T96 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF180Q86T96 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF180Q86T96 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
RNF180Q86T96 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF180Q86T96 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.66■■□□□ 1.38
RNF180Q86T96 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF180Q86T96 AC026366.1-201ENST00000488803 879 ntBASIC23.66■■□□□ 1.38
RNF180Q86T96 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF180Q86T96 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.66■■□□□ 1.38
RNF180Q86T96 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF180Q86T96 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF180Q86T96 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.66■■□□□ 1.38
RNF180Q86T96 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF180Q86T96 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF180Q86T96 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF180Q86T96 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF180Q86T96 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF180Q86T96 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF180Q86T96 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
RNF180Q86T96 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF180Q86T96 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.65■■□□□ 1.38
RNF180Q86T96 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.65■■□□□ 1.38
RNF180Q86T96 UNC93B5-201ENST00000530315 699 ntBASIC23.65■■□□□ 1.38
RNF180Q86T96 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF180Q86T96 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF180Q86T96 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF180Q86T96 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF180Q86T96 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF180Q86T96 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF180Q86T96 AL596275.1-201ENST00000423464 877 ntBASIC23.64■■□□□ 1.37
RNF180Q86T96 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.64■■□□□ 1.37
RNF180Q86T96 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF180Q86T96 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF180Q86T96 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF180Q86T96 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF180Q86T96 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF180Q86T96 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF180Q86T96 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF180Q86T96 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF180Q86T96 LSM12P1-201ENST00000411836 588 ntBASIC23.63■■□□□ 1.37
RNF180Q86T96 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.63■■□□□ 1.37
RNF180Q86T96 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF180Q86T96 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.63■■□□□ 1.37
RNF180Q86T96 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
RNF180Q86T96 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF180Q86T96 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF180Q86T96 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF180Q86T96 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF180Q86T96 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF180Q86T96 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF180Q86T96 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
RNF180Q86T96 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF180Q86T96 UNC93B4-201ENST00000505679 747 ntBASIC23.62■■□□□ 1.37
RNF180Q86T96 AP003097.1-201ENST00000530657 1135 ntBASIC23.62■■□□□ 1.37
RNF180Q86T96 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF180Q86T96 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF180Q86T96 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF180Q86T96 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
RNF180Q86T96 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF180Q86T96 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.61■■□□□ 1.37
RNF180Q86T96 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF180Q86T96 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF180Q86T96 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF180Q86T96 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.61■■□□□ 1.37
RNF180Q86T96 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF180Q86T96 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.61■■□□□ 1.37
RNF180Q86T96 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
RNF180Q86T96 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF180Q86T96 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.61■■□□□ 1.37
RNF180Q86T96 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF180Q86T96 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
RNF180Q86T96 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF180Q86T96 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.61■■□□□ 1.37
RNF180Q86T96 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.61■■□□□ 1.37
RNF180Q86T96 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF180Q86T96 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF180Q86T96 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF180Q86T96 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF180Q86T96 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF180Q86T96 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.6■■□□□ 1.37
RNF180Q86T96 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF180Q86T96 AC073648.6-201ENST00000641589 218 ntBASIC23.6■■□□□ 1.37
RNF180Q86T96 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF180Q86T96 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF180Q86T96 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF180Q86T96 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms