Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LIMS2Q7Z4I7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LIMS2Q7Z4I7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LIMS2Q7Z4I7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LIMS2Q7Z4I7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.56■■□□□ 1.2
LIMS2Q7Z4I7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LIMS2Q7Z4I7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.55■■□□□ 1.2
LIMS2Q7Z4I7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LIMS2Q7Z4I7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
LIMS2Q7Z4I7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LIMS2Q7Z4I7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
LIMS2Q7Z4I7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LIMS2Q7Z4I7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
LIMS2Q7Z4I7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.55■■□□□ 1.2
LIMS2Q7Z4I7 MYCNOS-205ENST00000641950 531 ntBASIC22.55■■□□□ 1.2
LIMS2Q7Z4I7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.55■■□□□ 1.2
LIMS2Q7Z4I7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.55■■□□□ 1.2
LIMS2Q7Z4I7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LIMS2Q7Z4I7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 SLC7A5P2-201ENST00000553010 536 ntBASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 AC080038.1-201ENST00000611274 1154 ntBASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LIMS2Q7Z4I7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 POU5F1P4-201ENST00000413175 1085 ntBASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 CDCA4P2-201ENST00000441182 718 ntBASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 AC011767.1-201ENST00000617410 1153 ntBASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 BID-214ENST00000617586 542 ntTSL 5 BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
LIMS2Q7Z4I7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 EP400NL-214ENST00000641289 2402 ntBASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LIMS2Q7Z4I7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
LIMS2Q7Z4I7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.52■■□□□ 1.19
LIMS2Q7Z4I7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
LIMS2Q7Z4I7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LIMS2Q7Z4I7 DUX4L16-201ENST00000555130 1264 ntBASIC22.51■■□□□ 1.19
LIMS2Q7Z4I7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.51■■□□□ 1.19
LIMS2Q7Z4I7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.51■■□□□ 1.19
LIMS2Q7Z4I7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LIMS2Q7Z4I7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.51■■□□□ 1.19
LIMS2Q7Z4I7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LIMS2Q7Z4I7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LIMS2Q7Z4I7 AC061975.6-201ENST00000579045 1553 ntBASIC22.5■■□□□ 1.19
LIMS2Q7Z4I7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.5■■□□□ 1.19
LIMS2Q7Z4I7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LIMS2Q7Z4I7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LIMS2Q7Z4I7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LIMS2Q7Z4I7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.5■■□□□ 1.19
LIMS2Q7Z4I7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.5■■□□□ 1.19
LIMS2Q7Z4I7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.5■■□□□ 1.19
LIMS2Q7Z4I7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.5■■□□□ 1.19
LIMS2Q7Z4I7 AC008175.2-201ENST00000612840 297 ntBASIC22.5■■□□□ 1.19
LIMS2Q7Z4I7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LIMS2Q7Z4I7 AC073111.5-205ENST00000641717 521 ntBASIC22.5■■□□□ 1.19
LIMS2Q7Z4I7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
LIMS2Q7Z4I7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
LIMS2Q7Z4I7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
LIMS2Q7Z4I7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.49■■□□□ 1.19
LIMS2Q7Z4I7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.49■■□□□ 1.19
LIMS2Q7Z4I7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms