Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 FBXW4P1-201ENST00000426721 2239 ntBASIC21.32■■□□□ 1
LYSMD3Q7Z3D4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LYSMD3Q7Z3D4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
LYSMD3Q7Z3D4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 AL162430.1-201ENST00000480705 870 ntBASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LYSMD3Q7Z3D4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LYSMD3Q7Z3D4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LYSMD3Q7Z3D4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.28■■□□□ 1
LYSMD3Q7Z3D4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.28■■□□□ 1
LYSMD3Q7Z3D4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.28■■□□□ 1
LYSMD3Q7Z3D4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LYSMD3Q7Z3D4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LYSMD3Q7Z3D4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LYSMD3Q7Z3D4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.28■■□□□ 1
LYSMD3Q7Z3D4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.28■■□□□ 1
LYSMD3Q7Z3D4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LYSMD3Q7Z3D4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LYSMD3Q7Z3D4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
LYSMD3Q7Z3D4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.28■■□□□ 1
LYSMD3Q7Z3D4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 KRT87P-202ENST00000534226 1464 ntBASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.27■■□□□ 1
LYSMD3Q7Z3D4 AC007375.3-201ENST00000600936 2314 ntBASIC21.27■□□□□ 0.99
LYSMD3Q7Z3D4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.27■□□□□ 0.99
LYSMD3Q7Z3D4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LYSMD3Q7Z3D4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LYSMD3Q7Z3D4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LYSMD3Q7Z3D4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.26■□□□□ 0.99
LYSMD3Q7Z3D4 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.26■□□□□ 0.99
LYSMD3Q7Z3D4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.26■□□□□ 0.99
LYSMD3Q7Z3D4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms