Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CHMP1BQ7LBR1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 AL162430.1-201ENST00000480705 870 ntBASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP1BQ7LBR1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 KRT18P14-201ENST00000534205 1250 ntBASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 CCDC92B-201ENST00000575506 885 ntBASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 AC092666.2-201ENST00000613287 246 ntBASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP1BQ7LBR1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 AL121603.2-201ENST00000557373 2117 ntBASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 OR7E47P-201ENST00000546390 1422 ntBASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMP1BQ7LBR1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHMP1BQ7LBR1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHMP1BQ7LBR1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
CHMP1BQ7LBR1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP1BQ7LBR1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMP1BQ7LBR1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP1BQ7LBR1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMP1BQ7LBR1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CHMP1BQ7LBR1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP1BQ7LBR1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP1BQ7LBR1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMP1BQ7LBR1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMP1BQ7LBR1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP1BQ7LBR1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP1BQ7LBR1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMP1BQ7LBR1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP1BQ7LBR1 GUSBP5-202ENST00000510805 1989 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms