Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 FIS1-205ENST00000463406 527 ntTSL 38.19□□□□□ -1.11e-6■■■■□ 19.6
LARP4Q71RC2 NDUFA4-205ENST00000486007 434 ntTSL 25.55□□□□□ -1.521e-6■■■■□ 19.6
LARP4Q71RC2 NDUFA4-202ENST00000463308 288 ntTSL 23.78□□□□□ -1.81e-6■■■■□ 19.6
LARP4Q71RC2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.041e-6■■■■□ 19.6
LARP4Q71RC2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.89■□□□□ 0.931e-6■■■■□ 19.6
LARP4Q71RC2 PRELID1-205ENST00000504594 886 ntTSL 316.29■□□□□ 0.21e-6■■■■□ 19.6
LARP4Q71RC2 GSK3A-203ENST00000453535 1897 ntTSL 527.87■■■□□ 2.051e-6■■■■□ 19.6
LARP4Q71RC2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.351e-6■■■■□ 19.6
LARP4Q71RC2 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.941e-6■■■■□ 19.6
LARP4Q71RC2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.3■■□□□ 1.161e-6■■■■□ 19.6
LARP4Q71RC2 GPX3-208ENST00000521722 464 ntTSL 311.85□□□□□ -0.513e-9■■■■□ 19.6
LARP4Q71RC2 ID3-203ENST00000486541 892 ntTSL 1 (best)16.67■□□□□ 0.262e-6■■■■□ 19.6
LARP4Q71RC2 LGALS1-205ENST00000472321 546 ntTSL 216.68■□□□□ 0.262e-7■■■■□ 19.6
LARP4Q71RC2 LGALS1-207ENST00000489315 516 ntTSL 316.68■□□□□ 0.262e-7■■■■□ 19.6
LARP4Q71RC2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.615e-14■■■■□ 19.6
LARP4Q71RC2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.15e-14■■■■□ 19.6
LARP4Q71RC2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.15e-14■■■■□ 19.6
LARP4Q71RC2 C16orf58-210ENST00000568491 2422 ntTSL 214.99□□□□□ -0.015e-14■■■■□ 19.6
LARP4Q71RC2 CD74-206ENST00000518797 1727 ntAPPRIS ALT2 TSL 213.3□□□□□ -0.287e-8■■■■□ 19.6
LARP4Q71RC2 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC12.55□□□□□ -0.47e-8■■■■□ 19.6
LARP4Q71RC2 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC12.4□□□□□ -0.427e-8■■■■□ 19.6
LARP4Q71RC2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.78■□□□□ 0.921e-6■■■■□ 19.6
LARP4Q71RC2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.19■□□□□ 0.983e-7■■■■□ 19.6
LARP4Q71RC2 NAGPA-206ENST00000562746 2260 ntTSL 220.43■□□□□ 0.863e-7■■■■□ 19.6
LARP4Q71RC2 NAGPA-207ENST00000563578 1494 ntTSL 319.38■□□□□ 0.693e-7■■■■□ 19.6
LARP4Q71RC2 NAGPA-213ENST00000568202 1843 ntTSL 518.6■□□□□ 0.573e-7■■■■□ 19.6
LARP4Q71RC2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.353e-7■■■■□ 19.6
LARP4Q71RC2 NAGPA-208ENST00000564397 3286 ntTSL 212.02□□□□□ -0.483e-7■■■■□ 19.6
LARP4Q71RC2 EMD-205ENST00000471965 800 ntTSL 221.39■■□□□ 1.016e-9■■■■□ 19.6
LARP4Q71RC2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.286e-9■■■■□ 19.6
LARP4Q71RC2 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.15■□□□□ 0.181e-8■■■■□ 19.6
LARP4Q71RC2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.338e-7■■■■□ 19.5
LARP4Q71RC2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.868e-7■■■■□ 19.5
LARP4Q71RC2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.258e-7■■■■□ 19.5
LARP4Q71RC2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.068e-7■■■■□ 19.5
LARP4Q71RC2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.637e-7■■■■□ 19.5
LARP4Q71RC2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.07□□□□□ -0.167e-7■■■■□ 19.5
LARP4Q71RC2 PMF1-201ENST00000368273 884 ntTSL 2 BASIC12.73□□□□□ -0.377e-7■■■■□ 19.5
LARP4Q71RC2 MGST3-201ENST00000367883 706 ntTSL 3 BASIC11.22□□□□□ -0.617e-7■■■■□ 19.5
LARP4Q71RC2 MGST3-204ENST00000367888 778 ntTSL 3 BASIC10.75□□□□□ -0.697e-7■■■■□ 19.5
LARP4Q71RC2 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC10.67□□□□□ -0.77e-7■■■■□ 19.5
LARP4Q71RC2 MGST3-212ENST00000495447 720 ntTSL 310.01□□□□□ -0.817e-7■■■■□ 19.5
LARP4Q71RC2 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.217e-7■■■■□ 19.5
LARP4Q71RC2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.73e-7■■■■□ 19.5
LARP4Q71RC2 GSTM3-205ENST00000488824 1118 ntTSL 219.27■□□□□ 0.683e-7■■■■□ 19.5
LARP4Q71RC2 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.333e-7■■■■□ 19.5
LARP4Q71RC2 GSTM3-203ENST00000476321 742 ntTSL 36.76□□□□□ -1.333e-7■■■■□ 19.5
LARP4Q71RC2 GSTM3-204ENST00000486823 783 ntTSL 25.83□□□□□ -1.483e-7■■■■□ 19.5
LARP4Q71RC2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.85■■□□□ 1.098e-7■■■■□ 19.5
LARP4Q71RC2 AC004980.1-202ENST00000450661 962 ntTSL 1 (best)21.7■■□□□ 1.068e-7■■■■□ 19.5
LARP4Q71RC2 AC004980.1-203ENST00000423084 748 ntTSL 320.65■□□□□ 0.98e-7■■■■□ 19.5
LARP4Q71RC2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.379e-8■■■■□ 19.5
LARP4Q71RC2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.24■□□□□ 0.679e-8■■■■□ 19.5
LARP4Q71RC2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.023e-9■■■■□ 19.5
LARP4Q71RC2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.93■□□□□ 0.463e-9■■■■□ 19.5
LARP4Q71RC2 AC011448.1-202ENST00000586674 1071 ntTSL 217.54■□□□□ 0.43e-9■■■■□ 19.5
LARP4Q71RC2 NDUFA13-202ENST00000502506 1166 ntTSL 214.77□□□□□ -0.053e-9■■■■□ 19.5
LARP4Q71RC2 NDUFA13-207ENST00000606722 502 ntTSL 311.64□□□□□ -0.553e-9■■■■□ 19.5
LARP4Q71RC2 NDUFA13-204ENST00000507754 991 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.693e-9■■■■□ 19.5
LARP4Q71RC2 MAPK8-210ENST00000432379 907 ntTSL 315.89■□□□□ 0.131e-6■■■■□ 19.5
LARP4Q71RC2 MAPK8-208ENST00000426557 860 ntTSL 414.3□□□□□ -0.121e-6■■■■□ 19.5
LARP4Q71RC2 MAPK8-207ENST00000395611 5844 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.731e-6■■■■□ 19.5
LARP4Q71RC2 MAPK8-206ENST00000374189 5796 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.871e-6■■■■□ 19.5
LARP4Q71RC2 MAPK8-209ENST00000429041 603 ntTSL 59.25□□□□□ -0.931e-6■■■■□ 19.5
LARP4Q71RC2 MAPK8-215ENST00000476134 732 ntTSL 36.02□□□□□ -1.451e-6■■■■□ 19.5
LARP4Q71RC2 MRPL11-206ENST00000534488 812 ntTSL 217.28■□□□□ 0.362e-8■■■■□ 19.5
LARP4Q71RC2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.122e-8■■■■□ 19.5
LARP4Q71RC2 MRPL11-202ENST00000329819 922 ntTSL 2 BASIC11.81□□□□□ -0.522e-8■■■■□ 19.5
LARP4Q71RC2 MRPL11-204ENST00000524576 2209 ntTSL 211.47□□□□□ -0.572e-8■■■■□ 19.5
LARP4Q71RC2 MRPL11-203ENST00000430466 1527 ntTSL 1 (best) BASIC10.38□□□□□ -0.752e-8■■■■□ 19.5
LARP4Q71RC2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.85■□□□□ 0.452e-8■■■■□ 19.4
LARP4Q71RC2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.322e-8■■■■□ 19.4
LARP4Q71RC2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.424e-9■■■■□ 19.4
LARP4Q71RC2 TUFM-204ENST00000569217 814 ntTSL 216.42■□□□□ 0.224e-9■■■■□ 19.4
LARP4Q71RC2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.117e-7■■■■□ 19.4
LARP4Q71RC2 UQCC2-203ENST00000606961 4365 nt12.46□□□□□ -0.424e-8■■■■□ 19.4
LARP4Q71RC2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.471e-12■■■■□ 19.4
LARP4Q71RC2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.061e-12■■■■□ 19.4
LARP4Q71RC2 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.251e-12■■■■□ 19.4
LARP4Q71RC2 PTTG1-204ENST00000519287 670 ntTSL 56.83□□□□□ -1.321e-12■■■■□ 19.4
LARP4Q71RC2 CHCHD5-204ENST00000469030 529 ntTSL 314.48□□□□□ -0.092e-6■■■■□ 19.4
LARP4Q71RC2 CHCHD5-203ENST00000454841 748 ntTSL 214.13□□□□□ -0.152e-6■■■■□ 19.4
LARP4Q71RC2 CHCHD5-201ENST00000324913 691 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.642e-6■■■■□ 19.4
LARP4Q71RC2 CHCHD5-202ENST00000409719 3272 ntTSL 2 BASIC9.64□□□□□ -0.872e-6■■■■□ 19.4
LARP4Q71RC2 MZT2A-204ENST00000445782 980 ntTSL 224.41■■□□□ 1.52e-10■■■■□ 19.3
LARP4Q71RC2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.082e-10■■■■□ 19.3
LARP4Q71RC2 MZT2A-202ENST00000410036 382 ntTSL 516.71■□□□□ 0.272e-10■■■■□ 19.3
LARP4Q71RC2 MZT2A-203ENST00000427024 679 ntTSL 315.29■□□□□ 0.042e-10■■■■□ 19.3
LARP4Q71RC2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.892e-6■■■■□ 19.3
LARP4Q71RC2 TIMM50-216ENST00000601358 1481 ntTSL 1 (best)19.3■□□□□ 0.682e-6■■■■□ 19.3
LARP4Q71RC2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.42■□□□□ 0.542e-6■■■■□ 19.3
LARP4Q71RC2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.312e-6■■■■□ 19.3
LARP4Q71RC2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.042e-6■■■■□ 19.3
LARP4Q71RC2 TIMM50-215ENST00000601252 1737 ntTSL 514.12□□□□□ -0.152e-6■■■■□ 19.3
LARP4Q71RC2 TIMM50-206ENST00000595961 2576 ntTSL 212.97□□□□□ -0.332e-6■■■■□ 19.3
LARP4Q71RC2 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.04□□□□□ -0.161e-6■■■■□ 19.3
LARP4Q71RC2 C22orf34-205ENST00000416411 542 ntTSL 412.99□□□□□ -0.331e-6■■■■□ 19.3
LARP4Q71RC2 RNASEH2C-205ENST00000531596 968 ntTSL 320.45■□□□□ 0.863e-6■■■■□ 19.3
LARP4Q71RC2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.14■□□□□ 0.493e-6■■■■□ 19.3
LARP4Q71RC2 RNASEH2C-206ENST00000533698 710 ntTSL 316.56■□□□□ 0.243e-6■■■■□ 19.3
Retrieved 100 of 15,922 protein–RNA pairs in 146.3 ms