Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP45Q70EL2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.28■■□□□ 1
USP45Q70EL2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP45Q70EL2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP45Q70EL2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.28■■□□□ 1
USP45Q70EL2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP45Q70EL2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP45Q70EL2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP45Q70EL2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.28■■□□□ 1
USP45Q70EL2 EEF1DP3-203ENST00000566025 782 ntBASIC21.28■■□□□ 1
USP45Q70EL2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP45Q70EL2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP45Q70EL2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP45Q70EL2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP45Q70EL2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
USP45Q70EL2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP45Q70EL2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP45Q70EL2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP45Q70EL2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP45Q70EL2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
USP45Q70EL2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.27■■□□□ 1
USP45Q70EL2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.27■■□□□ 1
USP45Q70EL2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.27■■□□□ 1
USP45Q70EL2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.27■■□□□ 1
USP45Q70EL2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
USP45Q70EL2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
USP45Q70EL2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.27■□□□□ 0.99
USP45Q70EL2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
USP45Q70EL2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.26■□□□□ 0.99
USP45Q70EL2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP45Q70EL2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP45Q70EL2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP45Q70EL2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP45Q70EL2 AC138907.5-202ENST00000569484 235 ntBASIC21.26■□□□□ 0.99
USP45Q70EL2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.26■□□□□ 0.99
USP45Q70EL2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP45Q70EL2 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.26■□□□□ 0.99
USP45Q70EL2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP45Q70EL2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.26■□□□□ 0.99
USP45Q70EL2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP45Q70EL2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP45Q70EL2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.25■□□□□ 0.99
USP45Q70EL2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP45Q70EL2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP45Q70EL2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.25■□□□□ 0.99
USP45Q70EL2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP45Q70EL2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP45Q70EL2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.25■□□□□ 0.99
USP45Q70EL2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP45Q70EL2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.25■□□□□ 0.99
USP45Q70EL2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
USP45Q70EL2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP45Q70EL2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP45Q70EL2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP45Q70EL2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP45Q70EL2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP45Q70EL2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.24■□□□□ 0.99
USP45Q70EL2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP45Q70EL2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.24■□□□□ 0.99
USP45Q70EL2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP45Q70EL2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
USP45Q70EL2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.24■□□□□ 0.99
USP45Q70EL2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.24■□□□□ 0.99
USP45Q70EL2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.24■□□□□ 0.99
USP45Q70EL2 AP001160.3-201ENST00000601484 763 ntBASIC21.24■□□□□ 0.99
USP45Q70EL2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP45Q70EL2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
USP45Q70EL2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
USP45Q70EL2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.24■□□□□ 0.99
USP45Q70EL2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP45Q70EL2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP45Q70EL2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
USP45Q70EL2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP45Q70EL2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP45Q70EL2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP45Q70EL2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP45Q70EL2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP45Q70EL2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP45Q70EL2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP45Q70EL2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.23■□□□□ 0.99
USP45Q70EL2 AC010141.2-201ENST00000452426 721 ntBASIC21.23■□□□□ 0.99
USP45Q70EL2 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.23■□□□□ 0.99
USP45Q70EL2 AC137761.2-201ENST00000561729 223 ntBASIC21.23■□□□□ 0.99
USP45Q70EL2 AC145350.3-201ENST00000569033 163 ntBASIC21.23■□□□□ 0.99
USP45Q70EL2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.23■□□□□ 0.99
USP45Q70EL2 AC022517.1-201ENST00000592429 346 ntBASIC21.23■□□□□ 0.99
USP45Q70EL2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP45Q70EL2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.23■□□□□ 0.99
USP45Q70EL2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP45Q70EL2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP45Q70EL2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP45Q70EL2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
USP45Q70EL2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP45Q70EL2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.22■□□□□ 0.99
USP45Q70EL2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.22■□□□□ 0.99
USP45Q70EL2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP45Q70EL2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.22■□□□□ 0.99
USP45Q70EL2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.22■□□□□ 0.99
USP45Q70EL2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP45Q70EL2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms