Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PACS1Q6VY07 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.39■■□□□ 1.02
PACS1Q6VY07 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PACS1Q6VY07 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
PACS1Q6VY07 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PACS1Q6VY07 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.39■■□□□ 1.01
PACS1Q6VY07 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PACS1Q6VY07 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PACS1Q6VY07 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.39■■□□□ 1.01
PACS1Q6VY07 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PACS1Q6VY07 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.39■■□□□ 1.01
PACS1Q6VY07 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.39■■□□□ 1.01
PACS1Q6VY07 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.39■■□□□ 1.01
PACS1Q6VY07 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.39■■□□□ 1.01
PACS1Q6VY07 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.39■■□□□ 1.01
PACS1Q6VY07 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PACS1Q6VY07 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PACS1Q6VY07 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PACS1Q6VY07 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PACS1Q6VY07 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PACS1Q6VY07 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PACS1Q6VY07 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.38■■□□□ 1.01
PACS1Q6VY07 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PACS1Q6VY07 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.38■■□□□ 1.01
PACS1Q6VY07 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PACS1Q6VY07 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.38■■□□□ 1.01
PACS1Q6VY07 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.38■■□□□ 1.01
PACS1Q6VY07 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PACS1Q6VY07 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.38■■□□□ 1.01
PACS1Q6VY07 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PACS1Q6VY07 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.37■■□□□ 1.01
PACS1Q6VY07 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.37■■□□□ 1.01
PACS1Q6VY07 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PACS1Q6VY07 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PACS1Q6VY07 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.37■■□□□ 1.01
PACS1Q6VY07 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PACS1Q6VY07 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PACS1Q6VY07 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.37■■□□□ 1.01
PACS1Q6VY07 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PACS1Q6VY07 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PACS1Q6VY07 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PACS1Q6VY07 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PACS1Q6VY07 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.37■■□□□ 1.01
PACS1Q6VY07 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PACS1Q6VY07 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PACS1Q6VY07 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PACS1Q6VY07 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.37■■□□□ 1.01
PACS1Q6VY07 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PACS1Q6VY07 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PACS1Q6VY07 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PACS1Q6VY07 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.36■■□□□ 1.01
PACS1Q6VY07 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PACS1Q6VY07 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.36■■□□□ 1.01
PACS1Q6VY07 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PACS1Q6VY07 SMUG1P1-201ENST00000590640 811 ntBASIC21.36■■□□□ 1.01
PACS1Q6VY07 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PACS1Q6VY07 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PACS1Q6VY07 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PACS1Q6VY07 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PACS1Q6VY07 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PACS1Q6VY07 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PACS1Q6VY07 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PACS1Q6VY07 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PACS1Q6VY07 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PACS1Q6VY07 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.35■■□□□ 1.01
PACS1Q6VY07 MIR572-201ENST00000384983 95 ntBASIC21.35■■□□□ 1.01
PACS1Q6VY07 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PACS1Q6VY07 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.35■■□□□ 1.01
PACS1Q6VY07 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PACS1Q6VY07 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.35■■□□□ 1.01
PACS1Q6VY07 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PACS1Q6VY07 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PACS1Q6VY07 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PACS1Q6VY07 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.34■■□□□ 1.01
PACS1Q6VY07 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PACS1Q6VY07 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PACS1Q6VY07 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PACS1Q6VY07 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PACS1Q6VY07 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PACS1Q6VY07 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PACS1Q6VY07 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PACS1Q6VY07 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PACS1Q6VY07 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PACS1Q6VY07 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.34■■□□□ 1.01
PACS1Q6VY07 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.34■■□□□ 1.01
PACS1Q6VY07 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.34■■□□□ 1.01
PACS1Q6VY07 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PACS1Q6VY07 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PACS1Q6VY07 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.34■■□□□ 1.01
PACS1Q6VY07 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.34■■□□□ 1.01
PACS1Q6VY07 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.34■■□□□ 1.01
PACS1Q6VY07 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PACS1Q6VY07 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.33■■□□□ 1.01
PACS1Q6VY07 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PACS1Q6VY07 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PACS1Q6VY07 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PACS1Q6VY07 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PACS1Q6VY07 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PACS1Q6VY07 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PACS1Q6VY07 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms