Protein–RNA interactions for Protein: Q6P1M0

SLC27A4, Long-chain fatty acid transport protein 4, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A4Q6P1M0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC27A4Q6P1M0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC27A4Q6P1M0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC27A4Q6P1M0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC27A4Q6P1M0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC27A4Q6P1M0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SLC27A4Q6P1M0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC27A4Q6P1M0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC27A4Q6P1M0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SLC27A4Q6P1M0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SLC27A4Q6P1M0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC27A4Q6P1M0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 AL049796.1-201ENST00000565336 1766 ntBASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLC27A4Q6P1M0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC27A4Q6P1M0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A4Q6P1M0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A4Q6P1M0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SLC27A4Q6P1M0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A4Q6P1M0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A4Q6P1M0 AC092171.4-201ENST00000609130 632 ntBASIC19.23■□□□□ 0.67
SLC27A4Q6P1M0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A4Q6P1M0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A4Q6P1M0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A4Q6P1M0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A4Q6P1M0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A4Q6P1M0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 AC003102.1-202ENST00000563394 1796 ntBASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A4Q6P1M0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC27A4Q6P1M0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms