Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
FAM53AQ6NSI3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FAM53AQ6NSI3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FAM53AQ6NSI3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 AL024507.2-201ENST00000606070 2574 ntBASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FAM53AQ6NSI3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 MIR939-201ENST00000401314 82 ntBASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 AL136967.2-201ENST00000623968 743 ntBASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM53AQ6NSI3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
FAM53AQ6NSI3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FAM53AQ6NSI3 AP006587.3-201ENST00000525742 1516 ntBASIC17.53■□□□□ 0.4
FAM53AQ6NSI3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM53AQ6NSI3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.53■□□□□ 0.4
FAM53AQ6NSI3 EDA-201ENST00000338901 1233 ntBASIC17.53■□□□□ 0.4
FAM53AQ6NSI3 AC027682.1-201ENST00000562846 899 ntBASIC17.53■□□□□ 0.4
FAM53AQ6NSI3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.53■□□□□ 0.4
FAM53AQ6NSI3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
FAM53AQ6NSI3 AL355001.2-201ENST00000620617 1191 ntBASIC17.53■□□□□ 0.4
FAM53AQ6NSI3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM53AQ6NSI3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FAM53AQ6NSI3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.53■□□□□ 0.4
FAM53AQ6NSI3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FAM53AQ6NSI3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
FAM53AQ6NSI3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.52■□□□□ 0.4
FAM53AQ6NSI3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
FAM53AQ6NSI3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.52■□□□□ 0.4
FAM53AQ6NSI3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FAM53AQ6NSI3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.52■□□□□ 0.4
FAM53AQ6NSI3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FAM53AQ6NSI3 SUDS3P1-201ENST00000505831 966 ntBASIC17.52■□□□□ 0.4
FAM53AQ6NSI3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.52■□□□□ 0.4
FAM53AQ6NSI3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.52■□□□□ 0.4
FAM53AQ6NSI3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FAM53AQ6NSI3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
FAM53AQ6NSI3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FAM53AQ6NSI3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FAM53AQ6NSI3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.52■□□□□ 0.39
FAM53AQ6NSI3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 AC104564.3-201ENST00000582367 638 ntBASIC17.51■□□□□ 0.39
FAM53AQ6NSI3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms