Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
KRT40Q6A162 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
KRT40Q6A162 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
KRT40Q6A162 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
KRT40Q6A162 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
KRT40Q6A162 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
KRT40Q6A162 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
KRT40Q6A162 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
KRT40Q6A162 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.58■■□□□ 1.53
KRT40Q6A162 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.58■■□□□ 1.53
KRT40Q6A162 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
KRT40Q6A162 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
KRT40Q6A162 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.58■■□□□ 1.52
KRT40Q6A162 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
KRT40Q6A162 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.58■■□□□ 1.52
KRT40Q6A162 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KRT40Q6A162 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
KRT40Q6A162 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KRT40Q6A162 BX005040.4-201ENST00000637145 1518 ntBASIC24.57■■□□□ 1.52
KRT40Q6A162 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
KRT40Q6A162 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.57■■□□□ 1.52
KRT40Q6A162 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.57■■□□□ 1.52
KRT40Q6A162 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
KRT40Q6A162 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KRT40Q6A162 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KRT40Q6A162 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KRT40Q6A162 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
KRT40Q6A162 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.57■■□□□ 1.52
KRT40Q6A162 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
KRT40Q6A162 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.57■■□□□ 1.52
KRT40Q6A162 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.57■■□□□ 1.52
KRT40Q6A162 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.57■■□□□ 1.52
KRT40Q6A162 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
KRT40Q6A162 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
KRT40Q6A162 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
KRT40Q6A162 AC009237.3-201ENST00000393279 1427 ntBASIC24.56■■□□□ 1.52
KRT40Q6A162 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
KRT40Q6A162 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.56■■□□□ 1.52
KRT40Q6A162 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.56■■□□□ 1.52
KRT40Q6A162 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.56■■□□□ 1.52
KRT40Q6A162 AC012414.1-201ENST00000556676 535 ntBASIC24.56■■□□□ 1.52
KRT40Q6A162 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.56■■□□□ 1.52
KRT40Q6A162 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
KRT40Q6A162 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.56■■□□□ 1.52
KRT40Q6A162 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.55■■□□□ 1.52
KRT40Q6A162 AC055733.4-201ENST00000638462 1354 ntBASIC24.55■■□□□ 1.52
KRT40Q6A162 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.55■■□□□ 1.52
KRT40Q6A162 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
KRT40Q6A162 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
KRT40Q6A162 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
KRT40Q6A162 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
KRT40Q6A162 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.54■■□□□ 1.52
KRT40Q6A162 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
KRT40Q6A162 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
KRT40Q6A162 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
KRT40Q6A162 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
KRT40Q6A162 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
KRT40Q6A162 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
KRT40Q6A162 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
KRT40Q6A162 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
KRT40Q6A162 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.54■■□□□ 1.52
KRT40Q6A162 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
KRT40Q6A162 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
KRT40Q6A162 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
KRT40Q6A162 YBX1P1-201ENST00000445822 960 ntBASIC24.54■■□□□ 1.52
KRT40Q6A162 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.54■■□□□ 1.52
KRT40Q6A162 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
KRT40Q6A162 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
KRT40Q6A162 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.54■■□□□ 1.52
KRT40Q6A162 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
KRT40Q6A162 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC24.53■■□□□ 1.52
KRT40Q6A162 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KRT40Q6A162 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
KRT40Q6A162 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.53■■□□□ 1.52
KRT40Q6A162 AC005224.4-201ENST00000583262 1652 ntBASIC24.53■■□□□ 1.52
KRT40Q6A162 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.53■■□□□ 1.52
KRT40Q6A162 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KRT40Q6A162 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.53■■□□□ 1.52
KRT40Q6A162 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.53■■□□□ 1.52
KRT40Q6A162 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
KRT40Q6A162 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.53■■□□□ 1.52
KRT40Q6A162 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KRT40Q6A162 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.52■■□□□ 1.52
KRT40Q6A162 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.52■■□□□ 1.52
KRT40Q6A162 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.52■■□□□ 1.52
KRT40Q6A162 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.52■■□□□ 1.52
KRT40Q6A162 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
KRT40Q6A162 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
KRT40Q6A162 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24.52■■□□□ 1.52
KRT40Q6A162 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
KRT40Q6A162 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
KRT40Q6A162 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.52■■□□□ 1.52
KRT40Q6A162 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
KRT40Q6A162 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.52■■□□□ 1.52
KRT40Q6A162 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.52■■□□□ 1.52
KRT40Q6A162 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.52■■□□□ 1.52
KRT40Q6A162 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
KRT40Q6A162 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
KRT40Q6A162 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
KRT40Q6A162 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms