Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL13A1Q5TAT6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.4■■□□□ 1.5
COL13A1Q5TAT6 AL162412.1-201ENST00000567129 965 ntBASIC24.4■■□□□ 1.5
COL13A1Q5TAT6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC24.4■■□□□ 1.5
COL13A1Q5TAT6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
COL13A1Q5TAT6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL13A1Q5TAT6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
COL13A1Q5TAT6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
COL13A1Q5TAT6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL13A1Q5TAT6 AC133681.1-201ENST00000465482 601 ntBASIC24.39■■□□□ 1.49
COL13A1Q5TAT6 SLC29A4P2-201ENST00000504749 1089 ntBASIC24.39■■□□□ 1.49
COL13A1Q5TAT6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC24.39■■□□□ 1.49
COL13A1Q5TAT6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC24.39■■□□□ 1.49
COL13A1Q5TAT6 DUT-205ENST00000558813 769 ntTSL 2 BASIC24.39■■□□□ 1.49
COL13A1Q5TAT6 AL591742.1-201ENST00000604433 565 ntBASIC24.39■■□□□ 1.49
COL13A1Q5TAT6 AL023875.1-201ENST00000640777 796 ntBASIC24.39■■□□□ 1.49
COL13A1Q5TAT6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL13A1Q5TAT6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL13A1Q5TAT6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL13A1Q5TAT6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL13A1Q5TAT6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC24.38■■□□□ 1.49
COL13A1Q5TAT6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC24.38■■□□□ 1.49
COL13A1Q5TAT6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.38■■□□□ 1.49
COL13A1Q5TAT6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC24.38■■□□□ 1.49
COL13A1Q5TAT6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL13A1Q5TAT6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL13A1Q5TAT6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.38■■□□□ 1.49
COL13A1Q5TAT6 ERN1-208ENST00000606895 2068 ntBASIC24.38■■□□□ 1.49
COL13A1Q5TAT6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
COL13A1Q5TAT6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC24.37■■□□□ 1.49
COL13A1Q5TAT6 KRT8P9-201ENST00000558927 1449 ntBASIC24.37■■□□□ 1.49
COL13A1Q5TAT6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.37■■□□□ 1.49
COL13A1Q5TAT6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL13A1Q5TAT6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC24.37■■□□□ 1.49
COL13A1Q5TAT6 AP000347.1-202ENST00000435868 847 ntBASIC24.37■■□□□ 1.49
COL13A1Q5TAT6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
COL13A1Q5TAT6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
COL13A1Q5TAT6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.37■■□□□ 1.49
COL13A1Q5TAT6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.37■■□□□ 1.49
COL13A1Q5TAT6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC24.37■■□□□ 1.49
COL13A1Q5TAT6 AC023511.2-201ENST00000618803 211 ntBASIC24.37■■□□□ 1.49
COL13A1Q5TAT6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
COL13A1Q5TAT6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
COL13A1Q5TAT6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.36■■□□□ 1.49
COL13A1Q5TAT6 AL355472.2-201ENST00000422958 438 ntBASIC24.36■■□□□ 1.49
COL13A1Q5TAT6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL13A1Q5TAT6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
COL13A1Q5TAT6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC24.36■■□□□ 1.49
COL13A1Q5TAT6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
COL13A1Q5TAT6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.36■■□□□ 1.49
COL13A1Q5TAT6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL13A1Q5TAT6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL13A1Q5TAT6 AC144652.1-201ENST00000609974 1624 ntBASIC24.35■■□□□ 1.49
COL13A1Q5TAT6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL13A1Q5TAT6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
COL13A1Q5TAT6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
COL13A1Q5TAT6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.35■■□□□ 1.49
COL13A1Q5TAT6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL13A1Q5TAT6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL13A1Q5TAT6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC24.35■■□□□ 1.49
COL13A1Q5TAT6 MTDHP1-201ENST00000605323 784 ntBASIC24.35■■□□□ 1.49
COL13A1Q5TAT6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
COL13A1Q5TAT6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL13A1Q5TAT6 AC004687.1-201ENST00000579003 1625 ntBASIC24.35■■□□□ 1.49
COL13A1Q5TAT6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL13A1Q5TAT6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL13A1Q5TAT6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC24.34■■□□□ 1.49
COL13A1Q5TAT6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.34■■□□□ 1.49
COL13A1Q5TAT6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC24.34■■□□□ 1.49
COL13A1Q5TAT6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC24.34■■□□□ 1.49
COL13A1Q5TAT6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.34■■□□□ 1.49
COL13A1Q5TAT6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL13A1Q5TAT6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.33■■□□□ 1.49
COL13A1Q5TAT6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL13A1Q5TAT6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.33■■□□□ 1.49
COL13A1Q5TAT6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL13A1Q5TAT6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC24.33■■□□□ 1.49
COL13A1Q5TAT6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC24.33■■□□□ 1.49
COL13A1Q5TAT6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL13A1Q5TAT6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
COL13A1Q5TAT6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
COL13A1Q5TAT6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.33■■□□□ 1.49
COL13A1Q5TAT6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.33■■□□□ 1.49
COL13A1Q5TAT6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
COL13A1Q5TAT6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.33■■□□□ 1.49
COL13A1Q5TAT6 LINC01568-207ENST00000641790 1380 ntBASIC24.32■■□□□ 1.48
COL13A1Q5TAT6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL13A1Q5TAT6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.32■■□□□ 1.48
COL13A1Q5TAT6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL13A1Q5TAT6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL13A1Q5TAT6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
COL13A1Q5TAT6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC24.32■■□□□ 1.48
COL13A1Q5TAT6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
COL13A1Q5TAT6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC24.32■■□□□ 1.48
COL13A1Q5TAT6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL13A1Q5TAT6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL13A1Q5TAT6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL13A1Q5TAT6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
COL13A1Q5TAT6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL13A1Q5TAT6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms