Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTSL3PQ5NE16 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTSL3PQ5NE16 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.94■□□□□ 0.94
CTSL3PQ5NE16 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSL3PQ5NE16 AC027612.3-201ENST00000413684 1047 ntBASIC20.94■□□□□ 0.94
CTSL3PQ5NE16 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTSL3PQ5NE16 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.94■□□□□ 0.94
CTSL3PQ5NE16 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSL3PQ5NE16 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSL3PQ5NE16 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 FEM1AP4-201ENST00000443167 1987 ntBASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSL3PQ5NE16 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 AC005229.4-201ENST00000610085 2198 ntBASIC20.92■□□□□ 0.94
CTSL3PQ5NE16 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTSL3PQ5NE16 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.91■□□□□ 0.94
CTSL3PQ5NE16 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CTSL3PQ5NE16 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTSL3PQ5NE16 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTSL3PQ5NE16 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.91■□□□□ 0.94
CTSL3PQ5NE16 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTSL3PQ5NE16 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.91■□□□□ 0.94
CTSL3PQ5NE16 AF106564.1-201ENST00000607058 2553 ntBASIC20.91■□□□□ 0.94
CTSL3PQ5NE16 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.91■□□□□ 0.94
CTSL3PQ5NE16 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSL3PQ5NE16 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
CTSL3PQ5NE16 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSL3PQ5NE16 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSL3PQ5NE16 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTSL3PQ5NE16 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTSL3PQ5NE16 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSL3PQ5NE16 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTSL3PQ5NE16 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.9■□□□□ 0.94
CTSL3PQ5NE16 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTSL3PQ5NE16 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSL3PQ5NE16 AL024507.2-201ENST00000606070 2574 ntBASIC20.9■□□□□ 0.94
CTSL3PQ5NE16 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.89■□□□□ 0.94
CTSL3PQ5NE16 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTSL3PQ5NE16 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTSL3PQ5NE16 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CTSL3PQ5NE16 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSL3PQ5NE16 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSL3PQ5NE16 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CTSL3PQ5NE16 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.89■□□□□ 0.93
CTSL3PQ5NE16 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSL3PQ5NE16 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CTSL3PQ5NE16 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CTSL3PQ5NE16 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.89■□□□□ 0.93
CTSL3PQ5NE16 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSL3PQ5NE16 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSL3PQ5NE16 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSL3PQ5NE16 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
CTSL3PQ5NE16 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
CTSL3PQ5NE16 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
CTSL3PQ5NE16 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.88■□□□□ 0.93
CTSL3PQ5NE16 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSL3PQ5NE16 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTSL3PQ5NE16 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.88■□□□□ 0.93
CTSL3PQ5NE16 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.88■□□□□ 0.93
CTSL3PQ5NE16 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.88■□□□□ 0.93
CTSL3PQ5NE16 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSL3PQ5NE16 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CTSL3PQ5NE16 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.88■□□□□ 0.93
CTSL3PQ5NE16 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSL3PQ5NE16 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.88■□□□□ 0.93
CTSL3PQ5NE16 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSL3PQ5NE16 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms