Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 AP004607.7-201ENST00000527152 1677 ntBASIC20.34■□□□□ 0.85
PDCD4Q53EL6 AL157384.1-201ENST00000445995 2473 ntBASIC20.34■□□□□ 0.85
PDCD4Q53EL6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDCD4Q53EL6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDCD4Q53EL6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
PDCD4Q53EL6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDCD4Q53EL6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
PDCD4Q53EL6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.33■□□□□ 0.85
PDCD4Q53EL6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDCD4Q53EL6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDCD4Q53EL6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDCD4Q53EL6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDCD4Q53EL6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDCD4Q53EL6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 AL512631.2-201ENST00000604634 923 ntBASIC20.32■□□□□ 0.84
PDCD4Q53EL6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDCD4Q53EL6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDCD4Q53EL6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDCD4Q53EL6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDCD4Q53EL6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDCD4Q53EL6 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.31■□□□□ 0.84
PDCD4Q53EL6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.31■□□□□ 0.84
PDCD4Q53EL6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PDCD4Q53EL6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
PDCD4Q53EL6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDCD4Q53EL6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDCD4Q53EL6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDCD4Q53EL6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDCD4Q53EL6 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.3■□□□□ 0.84
PDCD4Q53EL6 AL138724.1-201ENST00000606771 1088 ntBASIC20.3■□□□□ 0.84
PDCD4Q53EL6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDCD4Q53EL6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PDCD4Q53EL6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDCD4Q53EL6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDCD4Q53EL6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PDCD4Q53EL6 GUSBP5-201ENST00000418136 578 ntBASIC20.29■□□□□ 0.84
PDCD4Q53EL6 AP005435.1-201ENST00000529293 1178 ntBASIC20.29■□□□□ 0.84
PDCD4Q53EL6 AL035685.1-201ENST00000636663 812 ntBASIC20.29■□□□□ 0.84
PDCD4Q53EL6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDCD4Q53EL6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PDCD4Q53EL6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDCD4Q53EL6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.29■□□□□ 0.84
PDCD4Q53EL6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PDCD4Q53EL6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDCD4Q53EL6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDCD4Q53EL6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.28■□□□□ 0.84
PDCD4Q53EL6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDCD4Q53EL6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDCD4Q53EL6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.27■□□□□ 0.84
PDCD4Q53EL6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms