Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCSMST1Q4G0I0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.66■□□□□ 0.9
CCSMST1Q4G0I0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCSMST1Q4G0I0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCSMST1Q4G0I0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCSMST1Q4G0I0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.66■□□□□ 0.9
CCSMST1Q4G0I0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.66■□□□□ 0.9
CCSMST1Q4G0I0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.66■□□□□ 0.9
CCSMST1Q4G0I0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.66■□□□□ 0.9
CCSMST1Q4G0I0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCSMST1Q4G0I0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCSMST1Q4G0I0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCSMST1Q4G0I0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCSMST1Q4G0I0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCSMST1Q4G0I0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 KRT18P61-201ENST00000585825 1298 ntBASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCSMST1Q4G0I0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.64■□□□□ 0.9
CCSMST1Q4G0I0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCSMST1Q4G0I0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCSMST1Q4G0I0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCSMST1Q4G0I0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCSMST1Q4G0I0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCSMST1Q4G0I0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.64■□□□□ 0.89
CCSMST1Q4G0I0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCSMST1Q4G0I0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.64■□□□□ 0.89
CCSMST1Q4G0I0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.64■□□□□ 0.89
CCSMST1Q4G0I0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.64■□□□□ 0.89
CCSMST1Q4G0I0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.64■□□□□ 0.89
CCSMST1Q4G0I0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCSMST1Q4G0I0 AC244015.2-201ENST00000616358 1861 ntBASIC20.64■□□□□ 0.89
CCSMST1Q4G0I0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 AC104564.3-201ENST00000582367 638 ntBASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCSMST1Q4G0I0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCSMST1Q4G0I0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCSMST1Q4G0I0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.62■□□□□ 0.89
CCSMST1Q4G0I0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCSMST1Q4G0I0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.62■□□□□ 0.89
CCSMST1Q4G0I0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.62■□□□□ 0.89
CCSMST1Q4G0I0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCSMST1Q4G0I0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.62■□□□□ 0.89
CCSMST1Q4G0I0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCSMST1Q4G0I0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCSMST1Q4G0I0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCSMST1Q4G0I0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCSMST1Q4G0I0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.62■□□□□ 0.89
CCSMST1Q4G0I0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 AC007375.3-201ENST00000600936 2314 ntBASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 KRT87P-202ENST00000534226 1464 ntBASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 AC004854.2-201ENST00000608450 1441 ntBASIC20.61■□□□□ 0.89
CCSMST1Q4G0I0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCSMST1Q4G0I0 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.6■□□□□ 0.89
CCSMST1Q4G0I0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCSMST1Q4G0I0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms