Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRICKLE4Q2TBC4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE4Q2TBC4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE4Q2TBC4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE4Q2TBC4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE4Q2TBC4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE4Q2TBC4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE4Q2TBC4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE4Q2TBC4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.79■□□□□ 0.76
PRICKLE4Q2TBC4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE4Q2TBC4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE4Q2TBC4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE4Q2TBC4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE4Q2TBC4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 AC097381.1-201ENST00000429019 1296 ntBASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 KRT18P14-201ENST00000534205 1250 ntBASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 EEF1DP3-203ENST00000566025 782 ntBASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 Z98882.1-201ENST00000622160 2253 ntBASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE4Q2TBC4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE4Q2TBC4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE4Q2TBC4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PRICKLE4Q2TBC4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
PRICKLE4Q2TBC4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE4Q2TBC4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.77■□□□□ 0.76
PRICKLE4Q2TBC4 MIR6821-201ENST00000617625 74 ntBASIC19.77■□□□□ 0.76
PRICKLE4Q2TBC4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.77■□□□□ 0.76
PRICKLE4Q2TBC4 KRT87P-202ENST00000534226 1464 ntBASIC19.77■□□□□ 0.76
PRICKLE4Q2TBC4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE4Q2TBC4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE4Q2TBC4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE4Q2TBC4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PRICKLE4Q2TBC4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PRICKLE4Q2TBC4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
PRICKLE4Q2TBC4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 AC053503.5-201ENST00000601508 636 ntBASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE4Q2TBC4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.75■□□□□ 0.75
PRICKLE4Q2TBC4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PRICKLE4Q2TBC4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRICKLE4Q2TBC4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.74■□□□□ 0.75
PRICKLE4Q2TBC4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRICKLE4Q2TBC4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.74■□□□□ 0.75
PRICKLE4Q2TBC4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.74■□□□□ 0.75
PRICKLE4Q2TBC4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.74■□□□□ 0.75
PRICKLE4Q2TBC4 DUX4L2-201ENST00000561772 1275 ntBASIC19.74■□□□□ 0.75
PRICKLE4Q2TBC4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.74■□□□□ 0.75
PRICKLE4Q2TBC4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
PRICKLE4Q2TBC4 DUX4L6-201ENST00000626483 1275 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms