Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.73■□□□□ 0.75
SYPL1Q16563 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SYPL1Q16563 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYPL1Q16563 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SYPL1Q16563 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYPL1Q16563 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYPL1Q16563 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYPL1Q16563 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYPL1Q16563 TSPY26P-201ENST00000476365 1326 ntBASIC19.73■□□□□ 0.75
SYPL1Q16563 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.73■□□□□ 0.75
SYPL1Q16563 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYPL1Q16563 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYPL1Q16563 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYPL1Q16563 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
SYPL1Q16563 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYPL1Q16563 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SYPL1Q16563 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYPL1Q16563 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYPL1Q16563 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYPL1Q16563 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYPL1Q16563 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYPL1Q16563 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.72■□□□□ 0.75
SYPL1Q16563 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.72■□□□□ 0.75
SYPL1Q16563 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYPL1Q16563 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.72■□□□□ 0.75
SYPL1Q16563 AC027682.1-201ENST00000562846 899 ntBASIC19.72■□□□□ 0.75
SYPL1Q16563 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.72■□□□□ 0.75
SYPL1Q16563 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.72■□□□□ 0.75
SYPL1Q16563 AC110285.6-201ENST00000617652 491 ntBASIC19.72■□□□□ 0.75
SYPL1Q16563 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.72■□□□□ 0.75
SYPL1Q16563 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYPL1Q16563 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYPL1Q16563 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYPL1Q16563 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYPL1Q16563 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.71■□□□□ 0.75
SYPL1Q16563 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SYPL1Q16563 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYPL1Q16563 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SYPL1Q16563 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYPL1Q16563 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.71■□□□□ 0.75
SYPL1Q16563 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYPL1Q16563 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.71■□□□□ 0.75
SYPL1Q16563 AP001330.3-201ENST00000520123 633 ntBASIC19.71■□□□□ 0.75
SYPL1Q16563 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.71■□□□□ 0.75
SYPL1Q16563 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.71■□□□□ 0.75
SYPL1Q16563 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYPL1Q16563 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYPL1Q16563 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.71■□□□□ 0.75
SYPL1Q16563 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYPL1Q16563 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.71■□□□□ 0.75
SYPL1Q16563 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYPL1Q16563 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
SYPL1Q16563 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.7■□□□□ 0.74
SYPL1Q16563 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYPL1Q16563 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYPL1Q16563 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.7■□□□□ 0.74
SYPL1Q16563 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SYPL1Q16563 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SYPL1Q16563 EDA-201ENST00000338901 1233 ntBASIC19.7■□□□□ 0.74
SYPL1Q16563 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYPL1Q16563 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.7■□□□□ 0.74
SYPL1Q16563 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
SYPL1Q16563 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
SYPL1Q16563 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYPL1Q16563 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
SYPL1Q16563 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYPL1Q16563 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SYPL1Q16563 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYPL1Q16563 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYPL1Q16563 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SYPL1Q16563 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYPL1Q16563 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SYPL1Q16563 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYPL1Q16563 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.69■□□□□ 0.74
SYPL1Q16563 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.69■□□□□ 0.74
SYPL1Q16563 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SYPL1Q16563 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.69■□□□□ 0.74
SYPL1Q16563 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SYPL1Q16563 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SYPL1Q16563 AC105233.4-201ENST00000642045 216 ntBASIC19.69■□□□□ 0.74
SYPL1Q16563 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYPL1Q16563 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SYPL1Q16563 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SYPL1Q16563 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SYPL1Q16563 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYPL1Q16563 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.68■□□□□ 0.74
SYPL1Q16563 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.68■□□□□ 0.74
SYPL1Q16563 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms