Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-1P78426 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-1P78426 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-1P78426 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-1P78426 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NKX6-1P78426 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.59■□□□□ 0.57
NKX6-1P78426 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-1P78426 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-1P78426 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-1P78426 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NKX6-1P78426 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NKX6-1P78426 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.59■□□□□ 0.57
NKX6-1P78426 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NKX6-1P78426 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.59■□□□□ 0.57
NKX6-1P78426 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-1P78426 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-1P78426 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-1P78426 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-1P78426 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NKX6-1P78426 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX6-1P78426 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.58■□□□□ 0.57
NKX6-1P78426 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.58■□□□□ 0.57
NKX6-1P78426 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
NKX6-1P78426 C1orf229-201ENST00000623686 2258 ntBASIC18.58■□□□□ 0.57
NKX6-1P78426 OR7E47P-201ENST00000546390 1422 ntBASIC18.58■□□□□ 0.57
NKX6-1P78426 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
NKX6-1P78426 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NKX6-1P78426 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.58■□□□□ 0.57
NKX6-1P78426 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NKX6-1P78426 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-1P78426 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-1P78426 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-1P78426 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
NKX6-1P78426 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.58■□□□□ 0.56
NKX6-1P78426 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.58■□□□□ 0.56
NKX6-1P78426 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-1P78426 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-1P78426 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-1P78426 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-1P78426 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-1P78426 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.58■□□□□ 0.56
NKX6-1P78426 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-1P78426 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-1P78426 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NKX6-1P78426 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
NKX6-1P78426 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NKX6-1P78426 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX6-1P78426 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NKX6-1P78426 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NKX6-1P78426 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX6-1P78426 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.57■□□□□ 0.56
NKX6-1P78426 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX6-1P78426 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
NKX6-1P78426 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NKX6-1P78426 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NKX6-1P78426 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
NKX6-1P78426 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX6-1P78426 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX6-1P78426 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX6-1P78426 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.57■□□□□ 0.56
NKX6-1P78426 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.56■□□□□ 0.56
NKX6-1P78426 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.56■□□□□ 0.56
NKX6-1P78426 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX6-1P78426 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX6-1P78426 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX6-1P78426 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX6-1P78426 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.56■□□□□ 0.56
NKX6-1P78426 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.56■□□□□ 0.56
NKX6-1P78426 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX6-1P78426 AC066615.1-201ENST00000640911 628 ntBASIC18.56■□□□□ 0.56
NKX6-1P78426 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NKX6-1P78426 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.56■□□□□ 0.56
NKX6-1P78426 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NKX6-1P78426 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.56■□□□□ 0.56
NKX6-1P78426 AC009237.3-201ENST00000393279 1427 ntBASIC18.56■□□□□ 0.56
NKX6-1P78426 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NKX6-1P78426 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.56■□□□□ 0.56
NKX6-1P78426 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NKX6-1P78426 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NKX6-1P78426 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NKX6-1P78426 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.55■□□□□ 0.56
NKX6-1P78426 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NKX6-1P78426 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.55■□□□□ 0.56
NKX6-1P78426 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.55■□□□□ 0.56
NKX6-1P78426 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NKX6-1P78426 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NKX6-1P78426 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.55■□□□□ 0.56
NKX6-1P78426 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.55■□□□□ 0.56
NKX6-1P78426 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.55■□□□□ 0.56
NKX6-1P78426 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.55■□□□□ 0.56
NKX6-1P78426 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.55■□□□□ 0.56
NKX6-1P78426 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
NKX6-1P78426 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.55■□□□□ 0.56
NKX6-1P78426 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NKX6-1P78426 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NKX6-1P78426 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NKX6-1P78426 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.54■□□□□ 0.56
NKX6-1P78426 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
NKX6-1P78426 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.54■□□□□ 0.56
NKX6-1P78426 AC139530.1-201ENST00000575312 1977 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms