Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GABREP78334 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.21■□□□□ 0.83
GABREP78334 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GABREP78334 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GABREP78334 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.21■□□□□ 0.83
GABREP78334 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
GABREP78334 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GABREP78334 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.21■□□□□ 0.83
GABREP78334 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.21■□□□□ 0.83
GABREP78334 AC006058.3-201ENST00000606217 1069 ntBASIC20.21■□□□□ 0.83
GABREP78334 AC008175.2-201ENST00000612840 297 ntBASIC20.21■□□□□ 0.83
GABREP78334 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.21■□□□□ 0.83
GABREP78334 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
GABREP78334 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
GABREP78334 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
GABREP78334 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.21■□□□□ 0.83
GABREP78334 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GABREP78334 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
GABREP78334 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GABREP78334 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GABREP78334 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GABREP78334 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GABREP78334 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GABREP78334 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
GABREP78334 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
GABREP78334 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GABREP78334 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GABREP78334 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.2■□□□□ 0.82
GABREP78334 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GABREP78334 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GABREP78334 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GABREP78334 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
GABREP78334 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GABREP78334 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GABREP78334 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GABREP78334 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.19■□□□□ 0.82
GABREP78334 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.19■□□□□ 0.82
GABREP78334 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.19■□□□□ 0.82
GABREP78334 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
GABREP78334 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.19■□□□□ 0.82
GABREP78334 AC091874.3-201ENST00000512672 1195 ntBASIC20.19■□□□□ 0.82
GABREP78334 AC142381.4-202ENST00000563973 229 ntBASIC20.19■□□□□ 0.82
GABREP78334 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
GABREP78334 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GABREP78334 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABREP78334 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABREP78334 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.18■□□□□ 0.82
GABREP78334 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABREP78334 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.18■□□□□ 0.82
GABREP78334 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.18■□□□□ 0.82
GABREP78334 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GABREP78334 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
GABREP78334 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.18■□□□□ 0.82
GABREP78334 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.18■□□□□ 0.82
GABREP78334 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.18■□□□□ 0.82
GABREP78334 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.18■□□□□ 0.82
GABREP78334 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.18■□□□□ 0.82
GABREP78334 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.18■□□□□ 0.82
GABREP78334 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
GABREP78334 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABREP78334 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABREP78334 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.18■□□□□ 0.82
GABREP78334 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABREP78334 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
GABREP78334 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
GABREP78334 ANOS2P-203ENST00000472227 1816 ntBASIC20.18■□□□□ 0.82
GABREP78334 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABREP78334 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GABREP78334 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
GABREP78334 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
GABREP78334 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GABREP78334 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
GABREP78334 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
GABREP78334 AC128676.1-201ENST00000454392 318 ntBASIC20.17■□□□□ 0.82
GABREP78334 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.17■□□□□ 0.82
GABREP78334 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.17■□□□□ 0.82
GABREP78334 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
GABREP78334 LINC00526-201ENST00000581067 1875 ntBASIC20.17■□□□□ 0.82
GABREP78334 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.17■□□□□ 0.82
GABREP78334 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.17■□□□□ 0.82
GABREP78334 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GABREP78334 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GABREP78334 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GABREP78334 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GABREP78334 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.16■□□□□ 0.82
GABREP78334 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
GABREP78334 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GABREP78334 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
GABREP78334 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GABREP78334 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.16■□□□□ 0.82
GABREP78334 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GABREP78334 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.16■□□□□ 0.82
GABREP78334 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.16■□□□□ 0.82
GABREP78334 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.16■□□□□ 0.82
GABREP78334 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.16■□□□□ 0.82
GABREP78334 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GABREP78334 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GABREP78334 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GABREP78334 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GABREP78334 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms