Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC12.44□□□□□ -0.42
RPS28P62857 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPS28P62857 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RPS28P62857 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC12.44□□□□□ -0.42
RPS28P62857 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RPS28P62857 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RPS28P62857 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.44□□□□□ -0.42
RPS28P62857 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPS28P62857 AC012313.1-201ENST00000593393 3059 ntBASIC12.44□□□□□ -0.42
RPS28P62857 AC010542.4-201ENST00000563151 1910 ntBASIC12.44□□□□□ -0.42
RPS28P62857 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RPS28P62857 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPS28P62857 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPS28P62857 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPS28P62857 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPS28P62857 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC12.44□□□□□ -0.42
RPS28P62857 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPS28P62857 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
RPS28P62857 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
RPS28P62857 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS28P62857 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS28P62857 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPS28P62857 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS28P62857 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS28P62857 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS28P62857 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPS28P62857 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
RPS28P62857 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS28P62857 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS28P62857 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RPS28P62857 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS28P62857 COMT-203ENST00000403184 2217 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS28P62857 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.43□□□□□ -0.42
RPS28P62857 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS28P62857 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS28P62857 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS28P62857 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPS28P62857 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS28P62857 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS28P62857 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS28P62857 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
RPS28P62857 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS28P62857 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS28P62857 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS28P62857 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.42□□□□□ -0.42
RPS28P62857 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RPS28P62857 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RPS28P62857 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
RPS28P62857 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
RPS28P62857 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RPS28P62857 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RPS28P62857 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RPS28P62857 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
RPS28P62857 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPS28P62857 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RPS28P62857 AC116562.4-201ENST00000641316 2276 ntBASIC12.41□□□□□ -0.42
RPS28P62857 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RPS28P62857 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RPS28P62857 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RPS28P62857 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC12.41□□□□□ -0.42
RPS28P62857 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RPS28P62857 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC12.41□□□□□ -0.42
RPS28P62857 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPS28P62857 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC12.41□□□□□ -0.42
RPS28P62857 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
RPS28P62857 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC12.41□□□□□ -0.42
RPS28P62857 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms