Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SEC61BP60468 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SEC61BP60468 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC11.4□□□□□ -0.58
SEC61BP60468 AC007322.4-201ENST00000509611 723 ntBASIC11.4□□□□□ -0.58
SEC61BP60468 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
SEC61BP60468 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC11.4□□□□□ -0.58
SEC61BP60468 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC11.4□□□□□ -0.58
SEC61BP60468 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC11.4□□□□□ -0.58
SEC61BP60468 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC11.4□□□□□ -0.58
SEC61BP60468 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SEC61BP60468 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC11.4□□□□□ -0.58
SEC61BP60468 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SEC61BP60468 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SEC61BP60468 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SEC61BP60468 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SEC61BP60468 PREB-202ENST00000406567 1910 ntTSL 5 BASIC11.4□□□□□ -0.58
SEC61BP60468 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SEC61BP60468 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SEC61BP60468 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SEC61BP60468 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
SEC61BP60468 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SEC61BP60468 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
SEC61BP60468 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC11.4□□□□□ -0.59
SEC61BP60468 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SEC61BP60468 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
SEC61BP60468 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SEC61BP60468 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SEC61BP60468 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SEC61BP60468 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SEC61BP60468 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SEC61BP60468 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
SEC61BP60468 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SEC61BP60468 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC11.39□□□□□ -0.59
SEC61BP60468 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SEC61BP60468 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SEC61BP60468 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
SEC61BP60468 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC11.39□□□□□ -0.59
SEC61BP60468 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SEC61BP60468 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC11.39□□□□□ -0.59
SEC61BP60468 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.39□□□□□ -0.59
SEC61BP60468 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC11.39□□□□□ -0.59
SEC61BP60468 GAMT-205ENST00000640762 751 ntTSL 5 BASIC11.39□□□□□ -0.59
SEC61BP60468 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC11.39□□□□□ -0.59
SEC61BP60468 MKRN4P-201ENST00000444706 1521 ntBASIC11.39□□□□□ -0.59
SEC61BP60468 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SEC61BP60468 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SEC61BP60468 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SEC61BP60468 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SEC61BP60468 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SEC61BP60468 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC11.38□□□□□ -0.59
SEC61BP60468 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SEC61BP60468 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SEC61BP60468 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SEC61BP60468 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SEC61BP60468 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SEC61BP60468 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC11.38□□□□□ -0.59
SEC61BP60468 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SEC61BP60468 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC11.38□□□□□ -0.59
SEC61BP60468 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SEC61BP60468 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC11.38□□□□□ -0.59
SEC61BP60468 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC11.38□□□□□ -0.59
SEC61BP60468 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SEC61BP60468 CNN2P6-201ENST00000439038 900 ntBASIC11.38□□□□□ -0.59
SEC61BP60468 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SEC61BP60468 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC11.38□□□□□ -0.59
SEC61BP60468 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC11.38□□□□□ -0.59
SEC61BP60468 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC11.38□□□□□ -0.59
SEC61BP60468 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SEC61BP60468 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SEC61BP60468 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC11.38□□□□□ -0.59
SEC61BP60468 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC11.38□□□□□ -0.59
SEC61BP60468 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SEC61BP60468 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SEC61BP60468 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SEC61BP60468 LINC00526-201ENST00000581067 1875 ntBASIC11.38□□□□□ -0.59
SEC61BP60468 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC11.37□□□□□ -0.59
SEC61BP60468 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC11.37□□□□□ -0.59
SEC61BP60468 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SEC61BP60468 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SEC61BP60468 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SEC61BP60468 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SEC61BP60468 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SEC61BP60468 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SEC61BP60468 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SEC61BP60468 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SEC61BP60468 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SEC61BP60468 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
SEC61BP60468 APTR-203ENST00000430801 583 ntTSL 5 BASIC11.37□□□□□ -0.59
SEC61BP60468 CYP2T1P-201ENST00000432607 1285 ntBASIC11.37□□□□□ -0.59
SEC61BP60468 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SEC61BP60468 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC11.37□□□□□ -0.59
SEC61BP60468 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC11.37□□□□□ -0.59
SEC61BP60468 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC11.37□□□□□ -0.59
SEC61BP60468 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SEC61BP60468 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC11.37□□□□□ -0.59
SEC61BP60468 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SEC61BP60468 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC11.37□□□□□ -0.59
SEC61BP60468 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC11.37□□□□□ -0.59
SEC61BP60468 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SEC61BP60468 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms