Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.08■□□□□ 0.81
WNT3P56703 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3P56703 AC091305.1-201ENST00000479476 895 ntBASIC20.08■□□□□ 0.81
WNT3P56703 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
WNT3P56703 RARRES2P6-201ENST00000567333 442 ntBASIC20.08■□□□□ 0.81
WNT3P56703 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.08■□□□□ 0.81
WNT3P56703 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3P56703 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
WNT3P56703 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
WNT3P56703 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
WNT3P56703 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
WNT3P56703 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
WNT3P56703 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
WNT3P56703 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.07■□□□□ 0.8
WNT3P56703 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
WNT3P56703 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
WNT3P56703 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
WNT3P56703 AC099791.1-201ENST00000416440 715 ntBASIC20.07■□□□□ 0.8
WNT3P56703 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.07■□□□□ 0.8
WNT3P56703 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.07■□□□□ 0.8
WNT3P56703 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.07■□□□□ 0.8
WNT3P56703 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
WNT3P56703 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.07■□□□□ 0.8
WNT3P56703 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
WNT3P56703 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
WNT3P56703 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
WNT3P56703 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.07■□□□□ 0.8
WNT3P56703 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3P56703 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3P56703 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3P56703 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3P56703 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3P56703 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.06■□□□□ 0.8
WNT3P56703 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3P56703 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.06■□□□□ 0.8
WNT3P56703 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3P56703 AC233992.3-201ENST00000607491 485 ntBASIC20.06■□□□□ 0.8
WNT3P56703 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.06■□□□□ 0.8
WNT3P56703 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3P56703 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3P56703 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3P56703 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3P56703 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3P56703 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3P56703 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
WNT3P56703 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3P56703 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3P56703 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
WNT3P56703 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
WNT3P56703 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3P56703 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.05■□□□□ 0.8
WNT3P56703 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3P56703 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.05■□□□□ 0.8
WNT3P56703 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.05■□□□□ 0.8
WNT3P56703 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
WNT3P56703 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
WNT3P56703 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3P56703 AL049796.1-201ENST00000565336 1766 ntBASIC20.04■□□□□ 0.8
WNT3P56703 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3P56703 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3P56703 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.04■□□□□ 0.8
WNT3P56703 AC027682.1-201ENST00000562846 899 ntBASIC20.04■□□□□ 0.8
WNT3P56703 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3P56703 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.04■□□□□ 0.8
WNT3P56703 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3P56703 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
WNT3P56703 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.04■□□□□ 0.8
WNT3P56703 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3P56703 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3P56703 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3P56703 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3P56703 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
WNT3P56703 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.04■□□□□ 0.8
WNT3P56703 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.03■□□□□ 0.8
WNT3P56703 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3P56703 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3P56703 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
WNT3P56703 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3P56703 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
WNT3P56703 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3P56703 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3P56703 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3P56703 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.03■□□□□ 0.8
WNT3P56703 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3P56703 RASA4CP-201ENST00000424092 1398 ntBASIC20.03■□□□□ 0.8
WNT3P56703 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3P56703 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.03■□□□□ 0.8
WNT3P56703 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3P56703 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3P56703 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3P56703 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3P56703 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
WNT3P56703 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.03■□□□□ 0.8
WNT3P56703 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
WNT3P56703 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
WNT3P56703 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
WNT3P56703 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
WNT3P56703 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
WNT3P56703 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.02■□□□□ 0.8
WNT3P56703 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms