Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SUMO3P55854 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SUMO3P55854 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SUMO3P55854 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SUMO3P55854 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SUMO3P55854 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SUMO3P55854 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SUMO3P55854 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SUMO3P55854 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SUMO3P55854 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.24■□□□□ 0.67
SUMO3P55854 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SUMO3P55854 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SUMO3P55854 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SUMO3P55854 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.24■□□□□ 0.67
SUMO3P55854 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SUMO3P55854 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.24■□□□□ 0.67
SUMO3P55854 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.24■□□□□ 0.67
SUMO3P55854 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.24■□□□□ 0.67
SUMO3P55854 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.24■□□□□ 0.67
SUMO3P55854 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SUMO3P55854 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SUMO3P55854 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.24■□□□□ 0.67
SUMO3P55854 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SUMO3P55854 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SUMO3P55854 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUMO3P55854 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.23■□□□□ 0.67
SUMO3P55854 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUMO3P55854 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUMO3P55854 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUMO3P55854 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.23■□□□□ 0.67
SUMO3P55854 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.23■□□□□ 0.67
SUMO3P55854 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUMO3P55854 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUMO3P55854 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SUMO3P55854 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.23■□□□□ 0.67
SUMO3P55854 AC034268.1-201ENST00000441047 882 ntBASIC19.23■□□□□ 0.67
SUMO3P55854 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.23■□□□□ 0.67
SUMO3P55854 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
SUMO3P55854 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUMO3P55854 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUMO3P55854 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUMO3P55854 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUMO3P55854 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SUMO3P55854 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SUMO3P55854 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.22■□□□□ 0.67
SUMO3P55854 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUMO3P55854 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUMO3P55854 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SUMO3P55854 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
SUMO3P55854 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.22■□□□□ 0.67
SUMO3P55854 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.22■□□□□ 0.67
SUMO3P55854 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.22■□□□□ 0.67
SUMO3P55854 RARRES2P6-201ENST00000567333 442 ntBASIC19.22■□□□□ 0.67
SUMO3P55854 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.22■□□□□ 0.67
SUMO3P55854 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SUMO3P55854 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.22■□□□□ 0.67
SUMO3P55854 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SUMO3P55854 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
SUMO3P55854 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
SUMO3P55854 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUMO3P55854 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUMO3P55854 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUMO3P55854 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUMO3P55854 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUMO3P55854 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUMO3P55854 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.21■□□□□ 0.67
SUMO3P55854 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SUMO3P55854 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.21■□□□□ 0.67
SUMO3P55854 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUMO3P55854 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUMO3P55854 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.21■□□□□ 0.67
SUMO3P55854 DUX4L2-201ENST00000561772 1275 ntBASIC19.21■□□□□ 0.67
SUMO3P55854 AC138907.5-202ENST00000569484 235 ntBASIC19.21■□□□□ 0.67
SUMO3P55854 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.21■□□□□ 0.67
SUMO3P55854 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
SUMO3P55854 DUX4L6-201ENST00000626483 1275 ntBASIC19.21■□□□□ 0.67
SUMO3P55854 DUX4L1-201ENST00000627662 1275 ntBASIC19.21■□□□□ 0.67
SUMO3P55854 DUX4L8-201ENST00000629013 1275 ntBASIC19.21■□□□□ 0.67
SUMO3P55854 DUX4L3-201ENST00000630187 1275 ntBASIC19.21■□□□□ 0.67
SUMO3P55854 DUX4L7-201ENST00000630678 1275 ntBASIC19.21■□□□□ 0.67
SUMO3P55854 DUX4L5-201ENST00000630834 1275 ntBASIC19.21■□□□□ 0.67
SUMO3P55854 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUMO3P55854 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.21■□□□□ 0.67
SUMO3P55854 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.21■□□□□ 0.67
SUMO3P55854 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.21■□□□□ 0.67
SUMO3P55854 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.21■□□□□ 0.67
SUMO3P55854 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.21■□□□□ 0.67
SUMO3P55854 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SUMO3P55854 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUMO3P55854 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.21■□□□□ 0.67
SUMO3P55854 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.2■□□□□ 0.66
SUMO3P55854 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SUMO3P55854 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUMO3P55854 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SUMO3P55854 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SUMO3P55854 AC026271.2-201ENST00000428091 497 ntBASIC19.2■□□□□ 0.66
SUMO3P55854 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.2■□□□□ 0.66
SUMO3P55854 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.2■□□□□ 0.66
SUMO3P55854 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.2■□□□□ 0.66
SUMO3P55854 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms