Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH11P55287 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH11P55287 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH11P55287 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CDH11P55287 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CDH11P55287 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH11P55287 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH11P55287 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH11P55287 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH11P55287 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH11P55287 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH11P55287 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH11P55287 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CDH11P55287 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH11P55287 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH11P55287 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH11P55287 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH11P55287 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH11P55287 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH11P55287 AC099791.1-201ENST00000416440 715 ntBASIC19.35■□□□□ 0.69
CDH11P55287 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.35■□□□□ 0.69
CDH11P55287 RARRES2P6-201ENST00000567333 442 ntBASIC19.35■□□□□ 0.69
CDH11P55287 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH11P55287 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDH11P55287 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH11P55287 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH11P55287 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH11P55287 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CDH11P55287 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH11P55287 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH11P55287 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH11P55287 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH11P55287 AC073130.3-201ENST00000624389 2278 ntBASIC19.34■□□□□ 0.69
CDH11P55287 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH11P55287 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH11P55287 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH11P55287 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH11P55287 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH11P55287 AL499627.2-201ENST00000606283 725 ntBASIC19.34■□□□□ 0.69
CDH11P55287 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH11P55287 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH11P55287 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDH11P55287 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH11P55287 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDH11P55287 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH11P55287 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH11P55287 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH11P55287 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH11P55287 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH11P55287 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.33■□□□□ 0.69
CDH11P55287 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CDH11P55287 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH11P55287 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH11P55287 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CDH11P55287 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH11P55287 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH11P55287 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH11P55287 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.33■□□□□ 0.68
CDH11P55287 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CDH11P55287 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH11P55287 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH11P55287 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH11P55287 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
CDH11P55287 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH11P55287 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH11P55287 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH11P55287 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH11P55287 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH11P55287 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH11P55287 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH11P55287 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH11P55287 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH11P55287 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
CDH11P55287 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDH11P55287 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.32■□□□□ 0.68
CDH11P55287 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH11P55287 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDH11P55287 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH11P55287 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH11P55287 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH11P55287 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH11P55287 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH11P55287 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH11P55287 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH11P55287 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH11P55287 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH11P55287 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH11P55287 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CDH11P55287 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH11P55287 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH11P55287 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.31■□□□□ 0.68
CDH11P55287 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CDH11P55287 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.31■□□□□ 0.68
CDH11P55287 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH11P55287 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CDH11P55287 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH11P55287 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH11P55287 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH11P55287 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH11P55287 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms