Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH4P55283 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH4P55283 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH4P55283 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH4P55283 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH4P55283 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH4P55283 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.73■■□□□ 1.07
CDH4P55283 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH4P55283 KRT18P11-201ENST00000435214 1283 ntBASIC21.73■■□□□ 1.07
CDH4P55283 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
CDH4P55283 KRT18P20-201ENST00000548986 1279 ntBASIC21.73■■□□□ 1.07
CDH4P55283 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.73■■□□□ 1.07
CDH4P55283 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH4P55283 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CDH4P55283 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH4P55283 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CDH4P55283 EP400NL-214ENST00000641289 2402 ntBASIC21.72■■□□□ 1.07
CDH4P55283 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH4P55283 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH4P55283 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH4P55283 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH4P55283 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH4P55283 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH4P55283 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH4P55283 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.72■■□□□ 1.07
CDH4P55283 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH4P55283 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH4P55283 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH4P55283 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH4P55283 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH4P55283 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH4P55283 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH4P55283 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.71■■□□□ 1.07
CDH4P55283 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH4P55283 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH4P55283 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDH4P55283 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.71■■□□□ 1.07
CDH4P55283 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH4P55283 AC008175.2-201ENST00000612840 297 ntBASIC21.71■■□□□ 1.07
CDH4P55283 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.71■■□□□ 1.07
CDH4P55283 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH4P55283 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH4P55283 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH4P55283 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH4P55283 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH4P55283 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDH4P55283 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH4P55283 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH4P55283 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.7■■□□□ 1.06
CDH4P55283 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.7■■□□□ 1.06
CDH4P55283 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDH4P55283 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.7■■□□□ 1.06
CDH4P55283 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH4P55283 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH4P55283 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CDH4P55283 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDH4P55283 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH4P55283 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.69■■□□□ 1.06
CDH4P55283 AC004911.1-201ENST00000416316 871 ntBASIC21.69■■□□□ 1.06
CDH4P55283 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH4P55283 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH4P55283 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.69■■□□□ 1.06
CDH4P55283 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH4P55283 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH4P55283 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH4P55283 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.69■■□□□ 1.06
CDH4P55283 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDH4P55283 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDH4P55283 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.69■■□□□ 1.06
CDH4P55283 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH4P55283 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CDH4P55283 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH4P55283 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDH4P55283 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH4P55283 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH4P55283 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CDH4P55283 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH4P55283 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH4P55283 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CDH4P55283 POU5F1P4-201ENST00000413175 1085 ntBASIC21.68■■□□□ 1.06
CDH4P55283 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH4P55283 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH4P55283 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.68■■□□□ 1.06
CDH4P55283 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH4P55283 UBE2DNL-204ENST00000602536 740 ntBASIC21.68■■□□□ 1.06
CDH4P55283 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.68■■□□□ 1.06
CDH4P55283 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.68■■□□□ 1.06
CDH4P55283 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.68■■□□□ 1.06
CDH4P55283 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.68■■□□□ 1.06
CDH4P55283 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH4P55283 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH4P55283 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.68■■□□□ 1.06
CDH4P55283 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH4P55283 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
CDH4P55283 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH4P55283 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH4P55283 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CDH4P55283 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
CDH4P55283 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH4P55283 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms