Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.56■■□□□ 1.04
ATXN3P54252 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATXN3P54252 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATXN3P54252 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATXN3P54252 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
ATXN3P54252 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3P54252 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ATXN3P54252 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3P54252 AC010141.3-201ENST00000456659 717 ntBASIC21.55■■□□□ 1.04
ATXN3P54252 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
ATXN3P54252 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
ATXN3P54252 AL121832.2-201ENST00000610979 668 ntBASIC21.55■■□□□ 1.04
ATXN3P54252 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.55■■□□□ 1.04
ATXN3P54252 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.55■■□□□ 1.04
ATXN3P54252 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3P54252 AC127496.7-201ENST00000625110 1798 ntBASIC21.55■■□□□ 1.04
ATXN3P54252 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ATXN3P54252 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3P54252 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3P54252 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ATXN3P54252 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.55■■□□□ 1.04
ATXN3P54252 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3P54252 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3P54252 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3P54252 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3P54252 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3P54252 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3P54252 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.54■■□□□ 1.04
ATXN3P54252 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.54■■□□□ 1.04
ATXN3P54252 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.54■■□□□ 1.04
ATXN3P54252 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ATXN3P54252 AC137767.1-201ENST00000602918 1920 ntBASIC21.54■■□□□ 1.04
ATXN3P54252 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3P54252 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.54■■□□□ 1.04
ATXN3P54252 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.53■■□□□ 1.04
ATXN3P54252 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.53■■□□□ 1.04
ATXN3P54252 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.53■■□□□ 1.04
ATXN3P54252 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN3P54252 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN3P54252 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN3P54252 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN3P54252 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ATXN3P54252 TSPY20P-201ENST00000450910 630 ntBASIC21.53■■□□□ 1.04
ATXN3P54252 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.53■■□□□ 1.04
ATXN3P54252 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.53■■□□□ 1.04
ATXN3P54252 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN3P54252 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.53■■□□□ 1.04
ATXN3P54252 AC004687.1-201ENST00000579003 1625 ntBASIC21.53■■□□□ 1.04
ATXN3P54252 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.53■■□□□ 1.04
ATXN3P54252 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN3P54252 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN3P54252 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN3P54252 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN3P54252 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ATXN3P54252 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
ATXN3P54252 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3P54252 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3P54252 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3P54252 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3P54252 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3P54252 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3P54252 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.52■■□□□ 1.04
ATXN3P54252 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3P54252 SMUG1P1-201ENST00000590640 811 ntBASIC21.52■■□□□ 1.04
ATXN3P54252 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.52■■□□□ 1.04
ATXN3P54252 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3P54252 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3P54252 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3P54252 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATXN3P54252 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ATXN3P54252 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATXN3P54252 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
ATXN3P54252 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN3P54252 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ATXN3P54252 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
ATXN3P54252 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.51■■□□□ 1.03
ATXN3P54252 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
ATXN3P54252 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
ATXN3P54252 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN3P54252 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ATXN3P54252 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
ATXN3P54252 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.51■■□□□ 1.03
ATXN3P54252 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.51■■□□□ 1.03
ATXN3P54252 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.51■■□□□ 1.03
ATXN3P54252 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.51■■□□□ 1.03
ATXN3P54252 AC066615.1-201ENST00000640911 628 ntBASIC21.51■■□□□ 1.03
ATXN3P54252 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN3P54252 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
ATXN3P54252 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN3P54252 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN3P54252 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN3P54252 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.5■■□□□ 1.03
ATXN3P54252 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN3P54252 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATXN3P54252 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.5■■□□□ 1.03
ATXN3P54252 AC083906.2-201ENST00000511578 360 ntBASIC21.5■■□□□ 1.03
ATXN3P54252 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.5■■□□□ 1.03
ATXN3P54252 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.5■■□□□ 1.03
ATXN3P54252 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.5■■□□□ 1.03
ATXN3P54252 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms