Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YOR082CYOR082C 342 nt2.96□□□□□ -1.94
YNL040WP53960 ATP25YMR098C 1839 nt2.96□□□□□ -1.94
YNL040WP53960 CCT7YJL111W 1653 nt2.95□□□□□ -1.94
YNL040WP53960 IPI3YNL182C 1668 nt2.95□□□□□ -1.94
YNL040WP53960 KAR5YMR065W 1515 nt2.95□□□□□ -1.94
YNL040WP53960 RIT1YMR283C 1542 nt2.95□□□□□ -1.94
YNL040WP53960 RPL35BYDL136W 363 nt2.95□□□□□ -1.94
YNL040WP53960 CLB3YDL155W 1284 nt2.95□□□□□ -1.94
YNL040WP53960 PCD1YLR151C 1023 nt2.95□□□□□ -1.94
YNL040WP53960 BUR2YLR226W 1188 nt2.95□□□□□ -1.94
YNL040WP53960 OCA2YNL056W 594 nt2.95□□□□□ -1.94
YNL040WP53960 YOR114WYOR114W 885 nt2.95□□□□□ -1.94
YNL040WP53960 ARG2YJL071W 1725 nt2.95□□□□□ -1.94
YNL040WP53960 NUF2YOL069W 1356 nt2.95□□□□□ -1.94
YNL040WP53960 PLM2YDR501W 1566 nt2.95□□□□□ -1.94
YNL040WP53960 DBP5YOR046C 1449 nt2.94□□□□□ -1.94
YNL040WP53960 INP52YNL106C 3552 nt2.94□□□□□ -1.94
YNL040WP53960 YDL162CYDL162C 357 nt2.94□□□□□ -1.94
YNL040WP53960 PEF1YGR058W 1008 nt2.94□□□□□ -1.94
YNL040WP53960 YJR128WYJR128W 360 nt2.94□□□□□ -1.94
YNL040WP53960 COS1YNL336W 1146 nt2.94□□□□□ -1.94
YNL040WP53960 YBL096CYBL096C 309 nt2.94□□□□□ -1.94
YNL040WP53960 RPL33AYPL143W 324 nt2.94□□□□□ -1.94
YNL040WP53960 YBR116CYBR116C 528 nt2.94□□□□□ -1.94
YNL040WP53960 GIS4YML006C 2325 nt2.94□□□□□ -1.94
YNL040WP53960 CBP2YHL038C 1893 nt2.94□□□□□ -1.94
YNL040WP53960 ENA5YDR038C 3276 nt2.93□□□□□ -1.94
YNL040WP53960 BNA4YBL098W 1383 nt2.93□□□□□ -1.94
YNL040WP53960 NHP10YDL002C 612 nt2.93□□□□□ -1.94
YNL040WP53960 RRG1YDR065W 1098 nt2.93□□□□□ -1.94
YNL040WP53960 RPS10BYMR230W 318 nt2.93□□□□□ -1.94
YNL040WP53960 PFK27YOL136C 1194 nt2.93□□□□□ -1.94
YNL040WP53960 VAM10YOR068C 345 nt2.93□□□□□ -1.94
YNL040WP53960 YPR074W-AYPR074W-A 171 nt2.93□□□□□ -1.94
YNL040WP53960 MAK21YDR060W 3078 nt2.93□□□□□ -1.94
YNL040WP53960 DBP10YDL031W 2988 nt2.93□□□□□ -1.94
YNL040WP53960 RIM1YCR028C-A 408 nt2.92□□□□□ -1.94
YNL040WP53960 AIM6YDL237W 1173 nt2.92□□□□□ -1.94
YNL040WP53960 RNH202YDR279W 1053 nt2.92□□□□□ -1.94
YNL040WP53960 LRS4YDR439W 1044 nt2.92□□□□□ -1.94
YNL040WP53960 CFD1YIL003W 882 nt2.92□□□□□ -1.94
YNL040WP53960 YLR042CYLR042C 486 nt2.92□□□□□ -1.94
YNL040WP53960 SEC65YML105C 822 nt2.92□□□□□ -1.94
YNL040WP53960 YNL035CYNL035C 1170 nt2.92□□□□□ -1.94
YNL040WP53960 EAF7YNL136W 1278 nt2.92□□□□□ -1.94
YNL040WP53960 DGA1YOR245C 1257 nt2.92□□□□□ -1.94
YNL040WP53960 PFF1YBR074W 2931 nt2.91□□□□□ -1.94
YNL040WP53960 YJR061WYJR061W 2808 nt2.91□□□□□ -1.94
YNL040WP53960 YDR250CYDR250C 276 nt2.91□□□□□ -1.94
YNL040WP53960 YDR442WYDR442W 393 nt2.91□□□□□ -1.94
YNL040WP53960 PNC1YGL037C 651 nt2.91□□□□□ -1.94
YNL040WP53960 PCL7YIL050W 858 nt2.91□□□□□ -1.94
YNL040WP53960 TDA8YAL064C-A 381 nt2.91□□□□□ -1.94
YNL040WP53960 BPT1YLL015W 4680 nt2.91□□□□□ -1.94
YNL040WP53960 USB1YLR132C 873 nt2.91□□□□□ -1.94
YNL040WP53960 YAR075WYAR075W 474 nt2.91□□□□□ -1.94
YNL040WP53960 SAM37YMR060C 984 nt2.91□□□□□ -1.94
YNL040WP53960 CTL1YMR180C 963 nt2.91□□□□□ -1.94
YNL040WP53960 YOR238WYOR238W 912 nt2.91□□□□□ -1.94
YNL040WP53960 YBR089WYBR089W 600 nt2.91□□□□□ -1.94
YNL040WP53960 HRD1YOL013C 1656 nt2.91□□□□□ -1.94
YNL040WP53960 RPN4YDL020C 1596 nt2.91□□□□□ -1.94
YNL040WP53960 VAC8YEL013W 1737 nt2.9□□□□□ -1.94
YNL040WP53960 BCH1YMR237W 2175 nt2.9□□□□□ -1.94
YNL040WP53960 YDR491CYDR491C 492 nt2.9□□□□□ -1.95
YNL040WP53960 ERP6YGL002W 651 nt2.9□□□□□ -1.95
YNL040WP53960 LIF1YGL090W 1266 nt2.9□□□□□ -1.95
YNL040WP53960 YHR214C-DYHR214C-D 294 nt2.9□□□□□ -1.95
YNL040WP53960 YAR069CYAR069C 294 nt2.9□□□□□ -1.95
YNL040WP53960 YLR416CYLR416C 399 nt2.9□□□□□ -1.95
YNL040WP53960 RAS1YOR101W 930 nt2.9□□□□□ -1.95
YNL040WP53960 SUT2YPR009W 807 nt2.9□□□□□ -1.95
YNL040WP53960 YPR078CYPR078C 1119 nt2.9□□□□□ -1.95
YNL040WP53960 SPP381YBR152W 876 nt2.9□□□□□ -1.95
YNL040WP53960 PIN4YBL051C 2007 nt2.9□□□□□ -1.95
YNL040WP53960 HUL5YGL141W 2733 nt2.9□□□□□ -1.95
YNL040WP53960 GYP7YDL234C 2241 nt2.89□□□□□ -1.95
YNL040WP53960 IZH1YDR492W 951 nt2.89□□□□□ -1.95
YNL040WP53960 DOG1YHR044C 741 nt2.89□□□□□ -1.95
YNL040WP53960 SET1YHR119W 3243 nt2.89□□□□□ -1.95
YNL040WP53960 EPT1YHR123W 1176 nt2.89□□□□□ -1.95
YNL040WP53960 FIP1YJR093C 984 nt2.89□□□□□ -1.95
YNL040WP53960 POP8YBL018C 402 nt2.89□□□□□ -1.95
YNL040WP53960 YML047W-AYML047W-A 366 nt2.89□□□□□ -1.95
YNL040WP53960 COX14YML129C 213 nt2.89□□□□□ -1.95
YNL040WP53960 CPR8YNR028W 927 nt2.89□□□□□ -1.95
YNL040WP53960 HHF1YBR009C 312 nt2.89□□□□□ -1.95
YNL040WP53960 LDH1YBR204C 1128 nt2.89□□□□□ -1.95
YNL040WP53960 YPL216WYPL216W 3309 nt2.88□□□□□ -1.95
YNL040WP53960 YCR024C-BYCR024C-B 267 nt2.88□□□□□ -1.95
YNL040WP53960 PMI40YER003C 1290 nt2.88□□□□□ -1.95
YNL040WP53960 SPT2YER161C 1002 nt2.88□□□□□ -1.95
YNL040WP53960 ISC10YER180C 804 nt2.88□□□□□ -1.95
YNL040WP53960 LSM12YHR121W 564 nt2.88□□□□□ -1.95
YNL040WP53960 YLR339CYLR339C 552 nt2.88□□□□□ -1.95
YNL040WP53960 ATG16YMR159C 453 nt2.88□□□□□ -1.95
YNL040WP53960 snR11snR11 258 nt2.88□□□□□ -1.95
YNL040WP53960 YBR300CYBR300C 498 nt2.88□□□□□ -1.95
YNL040WP53960 CET1YPL228W 1650 nt2.88□□□□□ -1.95
YNL040WP53960 SRB8YCR081W 4284 nt2.88□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms