Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF140P52738 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF140P52738 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF140P52738 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF140P52738 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF140P52738 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF140P52738 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF140P52738 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.18■□□□□ 0.98
ZNF140P52738 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.18■□□□□ 0.98
ZNF140P52738 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF140P52738 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF140P52738 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ZNF140P52738 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ZNF140P52738 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF140P52738 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF140P52738 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ZNF140P52738 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF140P52738 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ZNF140P52738 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ZNF140P52738 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.17■□□□□ 0.98
ZNF140P52738 TERF1P2-201ENST00000583350 1212 ntBASIC21.17■□□□□ 0.98
ZNF140P52738 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF140P52738 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF140P52738 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF140P52738 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF140P52738 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
ZNF140P52738 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
ZNF140P52738 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF140P52738 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF140P52738 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF140P52738 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF140P52738 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF140P52738 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF140P52738 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF140P52738 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF140P52738 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ZNF140P52738 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
ZNF140P52738 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF140P52738 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF140P52738 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF140P52738 AC079140.4-201ENST00000507448 529 ntBASIC21.16■□□□□ 0.98
ZNF140P52738 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF140P52738 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF140P52738 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF140P52738 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF140P52738 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF140P52738 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF140P52738 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF140P52738 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF140P52738 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF140P52738 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF140P52738 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF140P52738 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF140P52738 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.15■□□□□ 0.98
ZNF140P52738 EEF1DP3-203ENST00000566025 782 ntBASIC21.15■□□□□ 0.98
ZNF140P52738 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF140P52738 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF140P52738 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ZNF140P52738 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ZNF140P52738 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF140P52738 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF140P52738 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.14■□□□□ 0.98
ZNF140P52738 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF140P52738 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
ZNF140P52738 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF140P52738 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
ZNF140P52738 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF140P52738 CCDC92B-201ENST00000575506 885 ntBASIC21.14■□□□□ 0.97
ZNF140P52738 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.14■□□□□ 0.97
ZNF140P52738 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF140P52738 KRT87P-202ENST00000534226 1464 ntBASIC21.13■□□□□ 0.97
ZNF140P52738 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ZNF140P52738 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF140P52738 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF140P52738 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.13■□□□□ 0.97
ZNF140P52738 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF140P52738 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF140P52738 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ZNF140P52738 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.13■□□□□ 0.97
ZNF140P52738 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF140P52738 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF140P52738 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF140P52738 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ZNF140P52738 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF140P52738 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF140P52738 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF140P52738 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF140P52738 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF140P52738 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF140P52738 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF140P52738 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF140P52738 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF140P52738 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF140P52738 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF140P52738 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF140P52738 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF140P52738 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF140P52738 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF140P52738 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF140P52738 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms