Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.65■■□□□ 1.38
CPT1AP50416 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.65■■□□□ 1.38
CPT1AP50416 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.65■■□□□ 1.38
CPT1AP50416 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.65■■□□□ 1.38
CPT1AP50416 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.65■■□□□ 1.38
CPT1AP50416 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.65■■□□□ 1.38
CPT1AP50416 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CPT1AP50416 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.65■■□□□ 1.38
CPT1AP50416 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CPT1AP50416 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CPT1AP50416 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CPT1AP50416 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.64■■□□□ 1.37
CPT1AP50416 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.64■■□□□ 1.37
CPT1AP50416 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CPT1AP50416 AC243732.1-201ENST00000612648 864 ntBASIC23.64■■□□□ 1.37
CPT1AP50416 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CPT1AP50416 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
CPT1AP50416 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.64■■□□□ 1.37
CPT1AP50416 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CPT1AP50416 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CPT1AP50416 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.64■■□□□ 1.37
CPT1AP50416 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPT1AP50416 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPT1AP50416 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CPT1AP50416 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.63■■□□□ 1.37
CPT1AP50416 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CPT1AP50416 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
CPT1AP50416 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.63■■□□□ 1.37
CPT1AP50416 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.63■■□□□ 1.37
CPT1AP50416 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CPT1AP50416 ITM2C-210ENST00000620962 501 ntBASIC23.63■■□□□ 1.37
CPT1AP50416 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CPT1AP50416 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CPT1AP50416 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CPT1AP50416 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CPT1AP50416 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.62■■□□□ 1.37
CPT1AP50416 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.62■■□□□ 1.37
CPT1AP50416 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.62■■□□□ 1.37
CPT1AP50416 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CPT1AP50416 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.62■■□□□ 1.37
CPT1AP50416 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CPT1AP50416 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.61■■□□□ 1.37
CPT1AP50416 KRT18P29-201ENST00000397031 1267 ntBASIC23.61■■□□□ 1.37
CPT1AP50416 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CPT1AP50416 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.61■■□□□ 1.37
CPT1AP50416 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.61■■□□□ 1.37
CPT1AP50416 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.61■■□□□ 1.37
CPT1AP50416 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CPT1AP50416 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CPT1AP50416 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CPT1AP50416 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
CPT1AP50416 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CPT1AP50416 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPT1AP50416 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPT1AP50416 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPT1AP50416 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPT1AP50416 AC097658.1-201ENST00000475555 843 ntBASIC23.6■■□□□ 1.37
CPT1AP50416 RARRES2P4-201ENST00000514074 484 ntBASIC23.6■■□□□ 1.37
CPT1AP50416 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.6■■□□□ 1.37
CPT1AP50416 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CPT1AP50416 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPT1AP50416 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.6■■□□□ 1.37
CPT1AP50416 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.6■■□□□ 1.37
CPT1AP50416 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CPT1AP50416 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CPT1AP50416 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CPT1AP50416 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CPT1AP50416 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CPT1AP50416 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CPT1AP50416 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.59■■□□□ 1.37
CPT1AP50416 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CPT1AP50416 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
CPT1AP50416 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.59■■□□□ 1.37
CPT1AP50416 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.59■■□□□ 1.37
CPT1AP50416 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.59■■□□□ 1.37
CPT1AP50416 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.59■■□□□ 1.37
CPT1AP50416 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CPT1AP50416 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CPT1AP50416 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CPT1AP50416 AC061975.6-201ENST00000579045 1553 ntBASIC23.59■■□□□ 1.37
CPT1AP50416 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.59■■□□□ 1.37
CPT1AP50416 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.59■■□□□ 1.37
CPT1AP50416 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CPT1AP50416 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CPT1AP50416 AC010980.2-201ENST00000587099 1412 ntBASIC23.59■■□□□ 1.37
CPT1AP50416 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.58■■□□□ 1.37
CPT1AP50416 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CPT1AP50416 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CPT1AP50416 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CPT1AP50416 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.58■■□□□ 1.37
CPT1AP50416 AC008687.6-201ENST00000596318 630 ntBASIC23.58■■□□□ 1.37
CPT1AP50416 AC083880.1-201ENST00000608266 535 ntBASIC23.58■■□□□ 1.37
CPT1AP50416 MYC-209ENST00000641252 345 ntBASIC23.58■■□□□ 1.37
CPT1AP50416 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CPT1AP50416 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CPT1AP50416 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CPT1AP50416 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CPT1AP50416 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CPT1AP50416 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CPT1AP50416 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms