Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
THBS3P49746 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
THBS3P49746 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
THBS3P49746 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
THBS3P49746 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.47■□□□□ 0.39
THBS3P49746 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
THBS3P49746 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
THBS3P49746 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.47■□□□□ 0.39
THBS3P49746 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
THBS3P49746 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.47■□□□□ 0.39
THBS3P49746 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
THBS3P49746 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
THBS3P49746 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.47■□□□□ 0.39
THBS3P49746 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.47■□□□□ 0.39
THBS3P49746 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
THBS3P49746 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS3P49746 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
THBS3P49746 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
THBS3P49746 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS3P49746 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS3P49746 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.46■□□□□ 0.39
THBS3P49746 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS3P49746 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS3P49746 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
THBS3P49746 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS3P49746 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS3P49746 AP005435.1-201ENST00000529293 1178 ntBASIC17.46■□□□□ 0.39
THBS3P49746 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS3P49746 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.46■□□□□ 0.39
THBS3P49746 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.46■□□□□ 0.39
THBS3P49746 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS3P49746 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.46■□□□□ 0.39
THBS3P49746 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.46■□□□□ 0.39
THBS3P49746 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
THBS3P49746 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.46■□□□□ 0.39
THBS3P49746 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
THBS3P49746 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
THBS3P49746 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS3P49746 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
THBS3P49746 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.45■□□□□ 0.38
THBS3P49746 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
THBS3P49746 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
THBS3P49746 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
THBS3P49746 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
THBS3P49746 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS3P49746 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS3P49746 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS3P49746 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.45■□□□□ 0.38
THBS3P49746 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
THBS3P49746 ZNRF2P3-201ENST00000424200 374 ntBASIC17.45■□□□□ 0.38
THBS3P49746 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.45■□□□□ 0.38
THBS3P49746 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.45■□□□□ 0.38
THBS3P49746 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS3P49746 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
THBS3P49746 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS3P49746 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS3P49746 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.44■□□□□ 0.38
THBS3P49746 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS3P49746 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
THBS3P49746 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.44■□□□□ 0.38
THBS3P49746 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.44■□□□□ 0.38
THBS3P49746 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
THBS3P49746 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.44■□□□□ 0.38
THBS3P49746 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
THBS3P49746 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
THBS3P49746 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.44■□□□□ 0.38
THBS3P49746 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
THBS3P49746 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.44■□□□□ 0.38
THBS3P49746 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.44■□□□□ 0.38
THBS3P49746 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS3P49746 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS3P49746 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS3P49746 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
THBS3P49746 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS3P49746 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS3P49746 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
THBS3P49746 AC026310.3-201ENST00000625186 2373 ntBASIC17.43■□□□□ 0.38
THBS3P49746 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.43■□□□□ 0.38
THBS3P49746 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS3P49746 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.43■□□□□ 0.38
THBS3P49746 SLC47A1P1-202ENST00000449666 945 ntBASIC17.43■□□□□ 0.38
THBS3P49746 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
THBS3P49746 AF213884.3-201ENST00000563833 479 ntBASIC17.43■□□□□ 0.38
THBS3P49746 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
THBS3P49746 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
THBS3P49746 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.43■□□□□ 0.38
THBS3P49746 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS3P49746 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.42■□□□□ 0.38
THBS3P49746 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.42■□□□□ 0.38
THBS3P49746 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS3P49746 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS3P49746 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS3P49746 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
THBS3P49746 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.42■□□□□ 0.38
THBS3P49746 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
THBS3P49746 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
THBS3P49746 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
THBS3P49746 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.42■□□□□ 0.38
THBS3P49746 MIR4767-201ENST00000582827 78 ntBASIC17.42■□□□□ 0.38
THBS3P49746 AL136967.2-201ENST00000623968 743 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms