Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 GRX7YBR014C 612 nt3.22□□□□□ -1.89
SSN8P47821 PBP2YBR233W 1242 nt3.22□□□□□ -1.89
SSN8P47821 YDR089WYDR089W 2610 nt3.22□□□□□ -1.89
SSN8P47821 ROM1YGR070W 3468 nt3.21□□□□□ -1.89
SSN8P47821 RRP5YMR229C 5190 nt3.21□□□□□ -1.9
SSN8P47821 TFB2YPL122C 1542 nt3.21□□□□□ -1.9
SSN8P47821 RRP42YDL111C 798 nt3.21□□□□□ -1.9
SSN8P47821 YDL162CYDL162C 357 nt3.21□□□□□ -1.9
SSN8P47821 COX18YGR062C 951 nt3.21□□□□□ -1.9
SSN8P47821 EPT1YHR123W 1176 nt3.21□□□□□ -1.9
SSN8P47821 IGO2YHR132W-A 396 nt3.21□□□□□ -1.9
SSN8P47821 EMC2YJR088C 879 nt3.21□□□□□ -1.9
SSN8P47821 ERP1YAR002C-A 660 nt3.21□□□□□ -1.9
SSN8P47821 RHO5YNL180C 996 nt3.21□□□□□ -1.9
SSN8P47821 PEX15YOL044W 1152 nt3.21□□□□□ -1.9
SSN8P47821 YPR077CYPR077C 372 nt3.21□□□□□ -1.9
SSN8P47821 YBR287WYBR287W 1284 nt3.21□□□□□ -1.9
SSN8P47821 FAS1YKL182W 6156 nt3.21□□□□□ -1.9
SSN8P47821 SIN4YNL236W 2925 nt3.21□□□□□ -1.9
SSN8P47821 MSM1YGR171C 1728 nt3.21□□□□□ -1.9
SSN8P47821 RAD5YLR032W 3510 nt3.2□□□□□ -1.9
SSN8P47821 BCH1YMR237W 2175 nt3.2□□□□□ -1.9
SSN8P47821 snR83snR83 306 nt3.2□□□□□ -1.9
SSN8P47821 YGR051CYGR051C 324 nt3.2□□□□□ -1.9
SSN8P47821 SWD2YKL018W 990 nt3.2□□□□□ -1.9
SSN8P47821 BUR2YLR226W 1188 nt3.2□□□□□ -1.9
SSN8P47821 RCE1YMR274C 948 nt3.2□□□□□ -1.9
SSN8P47821 TPT1YOL102C 693 nt3.2□□□□□ -1.9
SSN8P47821 PRP31YGR091W 1485 nt3.2□□□□□ -1.9
SSN8P47821 UBP5YER144C 2418 nt3.2□□□□□ -1.9
SSN8P47821 YEL025CYEL025C 3567 nt3.2□□□□□ -1.9
SSN8P47821 AEP2YMR282C 1743 nt3.19□□□□□ -1.9
SSN8P47821 HDA2YDR295C 2025 nt3.19□□□□□ -1.9
SSN8P47821 YDR149CYDR149C 708 nt3.19□□□□□ -1.9
SSN8P47821 YEL050W-AYEL050W-A 192 nt3.19□□□□□ -1.9
SSN8P47821 RGI1YER067W 486 nt3.19□□□□□ -1.9
SSN8P47821 THP2YHR167W 786 nt3.19□□□□□ -1.9
SSN8P47821 NDL1YLR254C 570 nt3.19□□□□□ -1.9
SSN8P47821 COQ5YML110C 924 nt3.19□□□□□ -1.9
SSN8P47821 CUP9YPL177C 921 nt3.19□□□□□ -1.9
SSN8P47821 CAF130YGR134W 3369 nt3.19□□□□□ -1.9
SSN8P47821 KIN3YAR018C 1308 nt3.19□□□□□ -1.9
SSN8P47821 GCD2YGR083C 1956 nt3.18□□□□□ -1.9
SSN8P47821 SKN7YHR206W 1869 nt3.18□□□□□ -1.9
SSN8P47821 TMA108YIL137C 2841 nt3.18□□□□□ -1.9
SSN8P47821 ATG26YLR189C 3597 nt3.18□□□□□ -1.9
SSN8P47821 PKP2YGL059W 1476 nt3.18□□□□□ -1.9
SSN8P47821 YDL242WYDL242W 354 nt3.18□□□□□ -1.9
SSN8P47821 UBC5YDR059C 447 nt3.18□□□□□ -1.9
SSN8P47821 DPP1YDR284C 870 nt3.18□□□□□ -1.9
SSN8P47821 DYN2YDR424C 279 nt3.18□□□□□ -1.9
SSN8P47821 YDR442WYDR442W 393 nt3.18□□□□□ -1.9
SSN8P47821 YDR491CYDR491C 492 nt3.18□□□□□ -1.9
SSN8P47821 YEL032C-AYEL032C-A 162 nt3.18□□□□□ -1.9
SSN8P47821 CTK2YJL006C 972 nt3.18□□□□□ -1.9
SSN8P47821 YKL091CYKL091C 933 nt3.18□□□□□ -1.9
SSN8P47821 RPS30AYLR287C-A 192 nt3.18□□□□□ -1.9
SSN8P47821 RDN58-1RDN58-1 158 nt3.18□□□□□ -1.9
SSN8P47821 RDN58-2RDN58-2 158 nt3.18□□□□□ -1.9
SSN8P47821 OST6YML019W 999 nt3.18□□□□□ -1.9
SSN8P47821 TPM1YNL079C 600 nt3.18□□□□□ -1.9
SSN8P47821 MCT1YOR221C 1083 nt3.18□□□□□ -1.9
SSN8P47821 RET3YPL010W 570 nt3.18□□□□□ -1.9
SSN8P47821 YBR300CYBR300C 498 nt3.18□□□□□ -1.9
SSN8P47821 ENA5YDR038C 3276 nt3.18□□□□□ -1.9
SSN8P47821 TFC1YBR123C 1950 nt3.18□□□□□ -1.9
SSN8P47821 CCT7YJL111W 1653 nt3.17□□□□□ -1.9
SSN8P47821 TSC11YER093C 4293 nt3.17□□□□□ -1.9
SSN8P47821 IOC3YFR013W 2364 nt3.17□□□□□ -1.9
SSN8P47821 HUL5YGL141W 2733 nt3.17□□□□□ -1.9
SSN8P47821 NKP1YDR383C 717 nt3.17□□□□□ -1.9
SSN8P47821 YER165C-AYER165C-A 357 nt3.17□□□□□ -1.9
SSN8P47821 STE2YFL026W 1296 nt3.17□□□□□ -1.9
SSN8P47821 YHR097CYHR097C 1101 nt3.17□□□□□ -1.9
SSN8P47821 YHR182C-AYHR182C-A 474 nt3.17□□□□□ -1.9
SSN8P47821 SNX4YJL036W 1272 nt3.17□□□□□ -1.9
SSN8P47821 FLD1YLR404W 858 nt3.17□□□□□ -1.9
SSN8P47821 YMR141CYMR141C 309 nt3.17□□□□□ -1.9
SSN8P47821 SME1YOR159C 285 nt3.17□□□□□ -1.9
SSN8P47821 SPR2YOR214C 711 nt3.17□□□□□ -1.9
SSN8P47821 MGE1YOR232W 687 nt3.17□□□□□ -1.9
SSN8P47821 YBR090CYBR090C 369 nt3.17□□□□□ -1.9
SSN8P47821 APM3YBR288C 1452 nt3.16□□□□□ -1.9
SSN8P47821 STP2YHR006W 1626 nt3.16□□□□□ -1.9
SSN8P47821 MIT1YEL007W 2001 nt3.16□□□□□ -1.9
SSN8P47821 MIG1YGL035C 1515 nt3.16□□□□□ -1.9
SSN8P47821 FAP7YDL166C 594 nt3.16□□□□□ -1.9
SSN8P47821 MIX14YDR031W 366 nt3.16□□□□□ -1.9
SSN8P47821 FRQ1YDR373W 573 nt3.16□□□□□ -1.9
SSN8P47821 MAM1YER106W 909 nt3.16□□□□□ -1.9
SSN8P47821 YER158W-AYER158W-A 216 nt3.16□□□□□ -1.9
SSN8P47821 TAM41YGR046W 1158 nt3.16□□□□□ -1.9
SSN8P47821 COQ9YLR201C 783 nt3.16□□□□□ -1.9
SSN8P47821 ASI2YNL159C 870 nt3.16□□□□□ -1.9
SSN8P47821 RRG7YOR305W 729 nt3.16□□□□□ -1.9
SSN8P47821 VPS33YLR396C 2076 nt3.16□□□□□ -1.9
SSN8P47821 POL2YNL262W 6669 nt3.16□□□□□ -1.9
SSN8P47821 STP1YDR463W 1560 nt3.16□□□□□ -1.9
SSN8P47821 CDC45YLR103C 1953 nt3.16□□□□□ -1.9
SSN8P47821 WHI3YNL197C 1986 nt3.16□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 30.5 ms