Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.23■□□□□ 0.83
SSR2P43308 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR2P43308 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR2P43308 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR2P43308 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR2P43308 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.23■□□□□ 0.83
SSR2P43308 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.23■□□□□ 0.83
SSR2P43308 AC027612.3-201ENST00000413684 1047 ntBASIC20.23■□□□□ 0.83
SSR2P43308 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.23■□□□□ 0.83
SSR2P43308 TPRG1LP1-201ENST00000598702 760 ntBASIC20.23■□□□□ 0.83
SSR2P43308 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR2P43308 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSR2P43308 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.23■□□□□ 0.83
SSR2P43308 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SSR2P43308 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SSR2P43308 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SSR2P43308 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSR2P43308 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSR2P43308 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.22■□□□□ 0.83
SSR2P43308 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.22■□□□□ 0.83
SSR2P43308 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.22■□□□□ 0.83
SSR2P43308 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.22■□□□□ 0.83
SSR2P43308 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
SSR2P43308 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.22■□□□□ 0.83
SSR2P43308 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.22■□□□□ 0.83
SSR2P43308 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSR2P43308 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSR2P43308 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSR2P43308 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.22■□□□□ 0.83
SSR2P43308 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSR2P43308 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSR2P43308 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.21■□□□□ 0.83
SSR2P43308 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSR2P43308 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSR2P43308 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.21■□□□□ 0.83
SSR2P43308 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSR2P43308 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.21■□□□□ 0.83
SSR2P43308 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSR2P43308 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSR2P43308 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSR2P43308 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.21■□□□□ 0.83
SSR2P43308 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSR2P43308 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSR2P43308 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SSR2P43308 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSR2P43308 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSR2P43308 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSR2P43308 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSR2P43308 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSR2P43308 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSR2P43308 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SSR2P43308 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSR2P43308 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSR2P43308 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSR2P43308 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SSR2P43308 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSR2P43308 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSR2P43308 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR2P43308 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SSR2P43308 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.19■□□□□ 0.82
SSR2P43308 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.19■□□□□ 0.82
SSR2P43308 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR2P43308 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR2P43308 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSR2P43308 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.19■□□□□ 0.82
SSR2P43308 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSR2P43308 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
SSR2P43308 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.19■□□□□ 0.82
SSR2P43308 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR2P43308 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR2P43308 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSR2P43308 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.18■□□□□ 0.82
SSR2P43308 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SSR2P43308 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SSR2P43308 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SSR2P43308 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SSR2P43308 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR2P43308 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.18■□□□□ 0.82
SSR2P43308 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.18■□□□□ 0.82
SSR2P43308 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.18■□□□□ 0.82
SSR2P43308 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR2P43308 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR2P43308 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SSR2P43308 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SSR2P43308 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR2P43308 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSR2P43308 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SSR2P43308 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR2P43308 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSR2P43308 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR2P43308 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SSR2P43308 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR2P43308 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SSR2P43308 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.17■□□□□ 0.82
SSR2P43308 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSR2P43308 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.17■□□□□ 0.82
SSR2P43308 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.17■□□□□ 0.82
SSR2P43308 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSR2P43308 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.17■□□□□ 0.82
SSR2P43308 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms