Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 TUM1YOR251C 915 nt3.17□□□□□ -1.9
RTR1P40084 SIN4YNL236W 2925 nt3.17□□□□□ -1.9
RTR1P40084 PFF1YBR074W 2931 nt3.16□□□□□ -1.9
RTR1P40084 YDR186CYDR186C 2634 nt3.16□□□□□ -1.9
RTR1P40084 CLG1YGL215W 1359 nt3.16□□□□□ -1.9
RTR1P40084 MSA1YOR066W 1890 nt3.16□□□□□ -1.9
RTR1P40084 PHO81YGR233C 3537 nt3.16□□□□□ -1.9
RTR1P40084 STI1YOR027W 1770 nt3.16□□□□□ -1.9
RTR1P40084 BSC2YDR275W 708 nt3.16□□□□□ -1.9
RTR1P40084 RPL1BYGL135W 654 nt3.16□□□□□ -1.9
RTR1P40084 YHR069C-AYHR069C-A 363 nt3.16□□□□□ -1.9
RTR1P40084 CAB2YIL083C 1098 nt3.16□□□□□ -1.9
RTR1P40084 SDP1YIL113W 630 nt3.16□□□□□ -1.9
RTR1P40084 TMA10YLR327C 261 nt3.16□□□□□ -1.9
RTR1P40084 YBL065WYBL065W 345 nt3.16□□□□□ -1.9
RTR1P40084 HHF1YBR009C 312 nt3.16□□□□□ -1.9
RTR1P40084 RPS11BYBR048W 471 nt3.16□□□□□ -1.9
RTR1P40084 RPL1AYPL220W 654 nt3.16□□□□□ -1.9
RTR1P40084 VBA4YDR119W 2307 nt3.16□□□□□ -1.9
RTR1P40084 SEC59YMR013C 1560 nt3.16□□□□□ -1.9
RTR1P40084 TEC1YBR083W 1461 nt3.16□□□□□ -1.9
RTR1P40084 VPS41YDR080W 2979 nt3.15□□□□□ -1.9
RTR1P40084 SRO77YBL106C 3033 nt3.15□□□□□ -1.9
RTR1P40084 LST7YGR057C 729 nt3.15□□□□□ -1.91
RTR1P40084 MDV1YJL112W 2145 nt3.15□□□□□ -1.91
RTR1P40084 YLR257WYLR257W 966 nt3.15□□□□□ -1.91
RTR1P40084 YOR283WYOR283W 693 nt3.15□□□□□ -1.91
RTR1P40084 KAR4YCL055W 1008 nt3.15□□□□□ -1.91
RTR1P40084 APM1YPL259C 1428 nt3.15□□□□□ -1.91
RTR1P40084 CTM1YHR109W 1758 nt3.15□□□□□ -1.91
RTR1P40084 MAK21YDR060W 3078 nt3.14□□□□□ -1.91
RTR1P40084 SPT2YER161C 1002 nt3.14□□□□□ -1.91
RTR1P40084 PRE4YFR050C 801 nt3.14□□□□□ -1.91
RTR1P40084 YIL156W-BYIL156W-B 222 nt3.14□□□□□ -1.91
RTR1P40084 IME1YJR094C 1083 nt3.14□□□□□ -1.91
RTR1P40084 HUB1YNR032C-A 222 nt3.14□□□□□ -1.91
RTR1P40084 YOR314WYOR314W 330 nt3.14□□□□□ -1.91
RTR1P40084 HSH49YOR319W 642 nt3.14□□□□□ -1.91
RTR1P40084 RIF1YBR275C 5751 nt3.14□□□□□ -1.91
RTR1P40084 EBS1YDR206W 2655 nt3.14□□□□□ -1.91
RTR1P40084 HRD1YOL013C 1656 nt3.14□□□□□ -1.91
RTR1P40084 MGR3YMR115W 1506 nt3.14□□□□□ -1.91
RTR1P40084 AML1YGR001C 747 nt3.13□□□□□ -1.91
RTR1P40084 RPS21BYJL136C 264 nt3.13□□□□□ -1.91
RTR1P40084 YNR062CYNR062C 984 nt3.13□□□□□ -1.91
RTR1P40084 AIM41YOR215C 558 nt3.13□□□□□ -1.91
RTR1P40084 SHG1YBR258C 429 nt3.13□□□□□ -1.91
RTR1P40084 AEP3YPL005W 1821 nt3.13□□□□□ -1.91
RTR1P40084 BNA4YBL098W 1383 nt3.12□□□□□ -1.91
RTR1P40084 MIP6YHR015W 1980 nt3.12□□□□□ -1.91
RTR1P40084 XRN1YGL173C 4587 nt3.12□□□□□ -1.91
RTR1P40084 MIC27YNL100W 705 nt3.12□□□□□ -1.91
RTR1P40084 YOR082CYOR082C 342 nt3.12□□□□□ -1.91
RTR1P40084 ARP8YOR141C 2646 nt3.12□□□□□ -1.91
RTR1P40084 RPN3YER021W 1572 nt3.12□□□□□ -1.91
RTR1P40084 RCY1YJL204C 2523 nt3.12□□□□□ -1.91
RTR1P40084 CCT7YJL111W 1653 nt3.11□□□□□ -1.91
RTR1P40084 REG1YDR028C 3045 nt3.11□□□□□ -1.91
RTR1P40084 YDR340WYDR340W 303 nt3.11□□□□□ -1.91
RTR1P40084 PEA2YER149C 1263 nt3.11□□□□□ -1.91
RTR1P40084 CCW14YLR390W-A 717 nt3.11□□□□□ -1.91
RTR1P40084 HMS1YOR032C 1305 nt3.11□□□□□ -1.91
RTR1P40084 HAP4YKL109W 1665 nt3.11□□□□□ -1.91
RTR1P40084 RTN1YDR233C 888 nt3.1□□□□□ -1.91
RTR1P40084 SMC2YFR031C 3513 nt3.1□□□□□ -1.91
RTR1P40084 UBP8YMR223W 1416 nt3.1□□□□□ -1.91
RTR1P40084 MSH2YOL090W 2895 nt3.09□□□□□ -1.91
RTR1P40084 NUM1YDR150W 8247 nt3.09□□□□□ -1.91
RTR1P40084 YCL076WYCL076W 744 nt3.09□□□□□ -1.91
RTR1P40084 SHU2YDR078C 672 nt3.09□□□□□ -1.91
RTR1P40084 YER165C-AYER165C-A 357 nt3.09□□□□□ -1.91
RTR1P40084 ARD1YHR013C 717 nt3.09□□□□□ -1.91
RTR1P40084 UAF30YOR295W 687 nt3.09□□□□□ -1.91
RTR1P40084 PHO91YNR013C 2685 nt3.09□□□□□ -1.91
RTR1P40084 TIF4631YGR162W 2859 nt3.08□□□□□ -1.92
RTR1P40084 MSS2YDL107W 1056 nt3.08□□□□□ -1.92
RTR1P40084 DYN2YDR424C 279 nt3.08□□□□□ -1.92
RTR1P40084 CGR1YGL029W 363 nt3.08□□□□□ -1.92
RTR1P40084 HHF2YNL030W 312 nt3.08□□□□□ -1.92
RTR1P40084 YPR053CYPR053C 456 nt3.08□□□□□ -1.92
RTR1P40084 NSA1YGL111W 1392 nt3.08□□□□□ -1.92
RTR1P40084 GIS4YML006C 2325 nt3.08□□□□□ -1.92
RTR1P40084 SMT3YDR510W 306 nt3.07□□□□□ -1.92
RTR1P40084 RPB9YGL070C 369 nt3.07□□□□□ -1.92
RTR1P40084 YHR052W-AYHR052W-A 195 nt3.07□□□□□ -1.92
RTR1P40084 YHR054W-AYHR054W-A 195 nt3.07□□□□□ -1.92
RTR1P40084 SPO16YHR153C 597 nt3.07□□□□□ -1.92
RTR1P40084 YAP5YIR018W 738 nt3.07□□□□□ -1.92
RTR1P40084 YLR225CYLR225C 1224 nt3.07□□□□□ -1.92
RTR1P40084 YOL107WYOL107W 1029 nt3.07□□□□□ -1.92
RTR1P40084 PNT1YOR266W 1272 nt3.07□□□□□ -1.92
RTR1P40084 RFM1YOR279C 933 nt3.07□□□□□ -1.92
RTR1P40084 YDR061WYDR061W 1620 nt3.07□□□□□ -1.92
RTR1P40084 RAD7YJR052W 1698 nt3.07□□□□□ -1.92
RTR1P40084 MSB1YOR188W 3414 nt3.07□□□□□ -1.92
RTR1P40084 STE11YLR362W 2154 nt3.07□□□□□ -1.92
RTR1P40084 ROM1YGR070W 3468 nt3.06□□□□□ -1.92
RTR1P40084 DUN1YDL101C 1542 nt3.06□□□□□ -1.92
RTR1P40084 CWH41YGL027C 2502 nt3.06□□□□□ -1.92
RTR1P40084 CBP2YHL038C 1893 nt3.06□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms